Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_3740 |
Symbol | |
ID | 4095087 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008061 |
Strand | - |
Start bp | 875615 |
End bp | 876784 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638017037 |
Product | porin |
Protein accession | YP_623605 |
Protein GI | 107026094 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACGTC GATCGAAGAA ACTGCCCTGG TACGTATTCG CGCCGGCACT CCTGCTCGCA GGCACGGCGC ACGCCCAGCA GAGCATCACG CTATACGGGC TGATAGACGA AGGCCTCAAC TTCACGAGCA ATGCAGGCGG TCATCGCGCC TGGCAGATGT CGAGCGGAGA CACATTCGGC AGCCGATGGG GCTTGAAAGG CAGTGAAGAC CTTGGCGGCG GCGACAAGGC CATCTTCCAG CTCGAAAACG GCTTCAACGT GAACAGCGGC AAGCTCGGTC AGGATTCGAG CATGTTCGGC CGTCAAGCGT TCGTGGGCCT GTCGTCGTCA CGGTATGGCA CGCTCACGCT CGGACGCCAG TACGATACCA GCGTCGACGC GCTCGGCTTC GGCGGCATCA CGGCGGCCGG CAACTGGGCC GGCGACATCG CGACCCACCC GTTCGACAAC GACAATACGG ACTGGGATTT CCGCGTCAAC AATGCCGTCA AGTACGTGAC CCCGACATAC CGCGGACTCA CCGCGGAAGC AATGTACGGC TTCAGCAACC AGCCCGGCGG ATTCTCGAAC AATCGCGTCT GGGGCGCCAC GCTGAACTAC CAGAGCGGCA ACCTGACTGC GGCGGCGTCC TACCTGAAGC TCAACAATCC CGGGCTCGCG GCGGGTGGCG CGGTCAACAG TGGCGATCTC TTCAACGGCT CGTCGCAGCA GGACATCGGC GTAGCGGCTT CCTACCAGTT TACCCACGTA CTCGTCGGCG CCGCGTGGTC CCATGTCGAT GTCTACAACC CCGCCGGCAA TGCGTGGATC GACAATACCG CCCTGCAAAA CGGCGCGACG TGGAACGCTT GGAAATTCGA CAACTTCGAA CTCAATGCTC AGTATTACTT TACTCATGCC CTCTGGCTGG GAGCGTCCTA CACGTTTACC ATCGCGCATC TGTACACGTC CGACACGAAA TATGTCCCCA AGTGGCACCA GATCGGCATG ATGCTCGACT ATGACCTGAG CAAGCGCACT TCGCTGTATC TGCAAGGCGC GTGGCAGCAT GTCGTCAGCG CCCGTACCGG GACCAGCTTT GACGATGCCC AGATCGTGGA CGCGTCGGCT GGCGCGTCGT CAGGGCCAAA CCAGATGGTC TATCGCATGG GCATGGTGCA TCGCTTCTAA
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Protein sequence | MKRRSKKLPW YVFAPALLLA GTAHAQQSIT LYGLIDEGLN FTSNAGGHRA WQMSSGDTFG SRWGLKGSED LGGGDKAIFQ LENGFNVNSG KLGQDSSMFG RQAFVGLSSS RYGTLTLGRQ YDTSVDALGF GGITAAGNWA GDIATHPFDN DNTDWDFRVN NAVKYVTPTY RGLTAEAMYG FSNQPGGFSN NRVWGATLNY QSGNLTAAAS YLKLNNPGLA AGGAVNSGDL FNGSSQQDIG VAASYQFTHV LVGAAWSHVD VYNPAGNAWI DNTALQNGAT WNAWKFDNFE LNAQYYFTHA LWLGASYTFT IAHLYTSDTK YVPKWHQIGM MLDYDLSKRT SLYLQGAWQH VVSARTGTSF DDAQIVDASA GASSGPNQMV YRMGMVHRF
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