Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_3621 |
Symbol | |
ID | 4095299 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008061 |
Strand | + |
Start bp | 748207 |
End bp | 749409 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638016919 |
Product | secretion protein HlyD |
Protein accession | YP_623487 |
Protein GI | 107025976 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0679447 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCTCCT TTTCCCTACG CAGAACCTCG CCATTGGGCG CGGCCTGCGC CCTGTTGCTG GCGTTGTCGG GCTGTCACGA CGGCAAAGGC ACATCGTCGG CCCAGCCGCT TCCCGAAGTG GGCGTCGCCA CCGTCGCGCC GCGTACCATC CGCCTCGCGG ACGAATTCAA CGGGCGCGTC GAAGCGGTGG ACGCCGTCGA ACTGCGGCCG CGCGTGAGCG GCTACCTGCA GCGTGTCGCG TACAAGGAGG GCGACGTGGT CGCGCAGGGC GCGTTGCTGT TCGAGATCGA TCCGCGCCCG TACCGGATCG CGCTCGACCG GGCGAATGCG CAGCAGCAGC GCGCCCGCGC GGCCGCGAGC CTCGCGAACG TGCAGTTGAA GCGCGTGCAG ACGCTGATCG ACGCGCATGC GACGTCGCAG GAAGAACTCG ACAACGCGCG CGCCACCGCG GAGCAGGCGC GTGCCGATCT GCAGGCGGCC GATGCGGCCG TGGCCGACGC GAAGCTCAAT CTCGGCTTCA CCGAAGTGCG CGCGCCGATC GCGGGCCGGG TCGGCCGTGC GGTCGCGACC GTCGGCAACC TCGCGCGGGC GGACGACACG CTGCTGACGA CCGTCGTGTC GCAGGACCCC GTCTACGTGT ATTTCGATTG CGACGAGCAA AGCTACCTGC GCTACAACGC GCGGCGCGCC GATCCGACGC ATCGCGCGAT CGGCGCCGAT CCGGTGCGCG TCGGCCTCGC GAACGAGACG GGCTTCCCGC ATGCGGGCAC CGTCGATTTC CTCGACAACC GGCTCGATCC GCAAACCGGC ACGATCCGCG CCCGCGTGCG GCTGCCGAAT GCGGACCATA CGTTCACGCC GGGCCTCTAT GCGCGCGTGC AGCTCGTCAG CGGCCGCGAC CAGGACGCTT TGCTGGTCGA CGACAAGGCG GTGCTGACCG ACCAGGACCG CAAGTACGTA TACGTGATCG GCCCGGGCGA CAAGGCGCTG CGCCGCGACG TGACGATCGG CCGCGAACTC GACGGCGAGC GGATCGTCGA GAAGGGGTTG CAGTCGGGCG ACCGCGTGGT GGTGGACGGC GTGCAGCGCA TCTACTATCC GGGCGCGCAG GTGAAGCCGA AGGCGCTGCC CGCACGCGCC GCGGCGGACC CCGGCGCCGG CACGCAGGCC GTGGCCGATG CCGGCGCGCC TGCCGCGCAC TGA
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Protein sequence | MLSFSLRRTS PLGAACALLL ALSGCHDGKG TSSAQPLPEV GVATVAPRTI RLADEFNGRV EAVDAVELRP RVSGYLQRVA YKEGDVVAQG ALLFEIDPRP YRIALDRANA QQQRARAAAS LANVQLKRVQ TLIDAHATSQ EELDNARATA EQARADLQAA DAAVADAKLN LGFTEVRAPI AGRVGRAVAT VGNLARADDT LLTTVVSQDP VYVYFDCDEQ SYLRYNARRA DPTHRAIGAD PVRVGLANET GFPHAGTVDF LDNRLDPQTG TIRARVRLPN ADHTFTPGLY ARVQLVSGRD QDALLVDDKA VLTDQDRKYV YVIGPGDKAL RRDVTIGREL DGERIVEKGL QSGDRVVVDG VQRIYYPGAQ VKPKALPARA AADPGAGTQA VADAGAPAAH
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