Gene Bcen_3487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_3487 
Symbol 
ID4095832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand- 
Start bp599865 
End bp600488 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content71% 
IMG OID638016786 
Producthaloacid dehalogenase-like hydrolase 
Protein accessionYP_623354 
Protein GI107025843 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00401487 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTACC GCCTCATCGC CTTCGACTTC GACGGCACGC TCGCCGATTC GCTCGACAGC 
TTTCTCGCCG CGCTGTCGGA AGCGTCGCGC CTGCACGGCT TTCGCGACGC GACGCCCGAA 
CTGCGCCCCG CGCTGCGCGG CATGTCGGCG CGCGACATCA TCCGCGCGCT CGACGTGCCG 
ATGTGGAAAG TGCCGCGCGT GACGATCGAC ATGCGCCGCC TGATGCGGCC GCGCATCGCG 
AACGTGCGGC TCTTTCCCGG CGTCGACGAA ACGTTCGACG CGCTCGCCGC GCGCGGCATC 
CGCATCGCGA TCGCCACGTC GAACACCGAG GAGATCGTGC GCGACCGGCT CGGCCCGCGC 
GCCGGCGCAC GCGTCGACCA TTTTGCCTGC GGCATTCCGC TGTTCGGCAA GGCGCGCCGT 
CTGCGCGCGC TCGTTCACGA GGCCGGTGTG CGCGCCGACG AAGTGCTGTA CGTCGGCGAC 
GAAATCCGCG ATGCCGACGC GGCACGGCAC GCGCGTATCG CCTTCCAGGG CGTCGCGTGG 
GGCTACACGG CGCCCGACGC GTTGCAGGCA CATTGCGCGA CGCCGTTGCT GCCGCGCCTC 
GATGCGCTGC TCGATCGCGT GTAA
 
Protein sequence
MTYRLIAFDF DGTLADSLDS FLAALSEASR LHGFRDATPE LRPALRGMSA RDIIRALDVP 
MWKVPRVTID MRRLMRPRIA NVRLFPGVDE TFDALAARGI RIAIATSNTE EIVRDRLGPR 
AGARVDHFAC GIPLFGKARR LRALVHEAGV RADEVLYVGD EIRDADAARH ARIAFQGVAW 
GYTAPDALQA HCATPLLPRL DALLDRV