Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_3298 |
Symbol | |
ID | 4093833 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008061 |
Strand | + |
Start bp | 384921 |
End bp | 386060 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638016597 |
Product | porin |
Protein accession | YP_623166 |
Protein GI | 107025655 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.406065 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCATA CGAAAGTTGC CGTAGCCGCC GCGCTTGCAT GCGCGGCCTG TATTCCCGCC GTCGGACATG CGCAAAGCAG CGTGACGCTG TACGGGATTC TCGACGCGGG TATCACGTAC GTGAACAACA CGGGCGGTTC GCACGTGGTC AAGTTCGACG ACGGCGTCGC CTACGGGAAC CGCTTCGGCC TCAAGGGCAC CGAAGACCTG GGCGGCGGCC TGAAGGCCGT GTTCACGCTC GAGAGCGGCT TCCATCTCGG CAACGGGCAA CTCGGCTTCG GCGGCGCGGA ATTCGGCCGT CAGGCGTATG TCGGCCTGCA GAACGACTGG GGCACGCTGT CGTTCGGCAA CCAGCTCGAC ATCACCAACG AACTCGTATC GATCTACAAC ATCTCGGCGT GGGGCAGCGG CTACGCGATC CACCAGGGCG ACTTCGACCG CTTCAACGGC GACCGCCTGC CGAACTCGGT GAAGTTCCTG TCGAACGACC TGAGCGGCTT CAAGTTCGGC GCGATGTACT CGTTCGGCAA CGTCGCGGGC AACTTCCATC GCAACAGCGC ATGGAGCGCG GGCGCGAGCT TCACGAAGGG TGACTTCTCG ATCGGCGCCG CGTACACGCG CCTGAACAAC CCGAACGGCA TCTACGCGTT CGATCCGTAC GCGATGATCG GCACGCACAC GTTCCTCGGC CAGCAGACCG TCACCGTCGA TCCGGCGACC GGCGCGCGCA CCGACCTGTT CGCGAACACG CCGATGGACG TCGACAGCCA GGGCACGTTC GGCATCGGCA CCAGCTACAC GATCGGCAAG CTGACGCTCG ACGCCAACTA CTCGTACACG ACGATCAAGG GCTTCGGCCA GTCGTCGCAC ATGCAGGTGT ACGAAGGCGG CGGCCTGTAC CAGTTCACGC CGGCGCTGAG CTTCATCGCG GGCTACCAGC ACACGCGCTT CGAAGGCCAT CACTGGAACC AGGGCACGGC GGGCCTGCAT TACCTGCTGT CGAAGCGCAC CGACATCTAC ATCTCCGGCG ATTACCTGCG CGCGTCGCAG GGCGTCGATG CGGTGGTCGG CTACAGCTTC ACGCCGTCGA CGACGCAGAC GCAGGCCGAC GTGCGGATCG GGATGCGGCA TTCGTTCTGA
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Protein sequence | MKHTKVAVAA ALACAACIPA VGHAQSSVTL YGILDAGITY VNNTGGSHVV KFDDGVAYGN RFGLKGTEDL GGGLKAVFTL ESGFHLGNGQ LGFGGAEFGR QAYVGLQNDW GTLSFGNQLD ITNELVSIYN ISAWGSGYAI HQGDFDRFNG DRLPNSVKFL SNDLSGFKFG AMYSFGNVAG NFHRNSAWSA GASFTKGDFS IGAAYTRLNN PNGIYAFDPY AMIGTHTFLG QQTVTVDPAT GARTDLFANT PMDVDSQGTF GIGTSYTIGK LTLDANYSYT TIKGFGQSSH MQVYEGGGLY QFTPALSFIA GYQHTRFEGH HWNQGTAGLH YLLSKRTDIY ISGDYLRASQ GVDAVVGYSF TPSTTQTQAD VRIGMRHSF
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