Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_3280 |
Symbol | |
ID | 4096091 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008061 |
Strand | - |
Start bp | 360781 |
End bp | 362217 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638016579 |
Product | GntR family transcriptional regulator |
Protein accession | YP_623148 |
Protein GI | 107025637 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGCGCT ATGCGGTGCT GGCGCAGACG ATCGCCGACG CGATCCGGCG CGGCGACCTG GCGGCCGGCG CGCGCATCCC TACCGTGCGC GCGGCATGCC GCGCGTATCG GGTGAGCCCG TCCACGGTGT TTCGTGCGTA CTACGCGCTC GAAAGCGAGG GCCTGATCGT CGCGCGGGCG CGCTCGGGTT ATTTCGTGGC GAACGTCGCG GACAAGCACG TGCGGTTCGG CCGCGATTCG CCGCGCAAGC CGGGCGCCGC GCAGAACGAC GCCGCTCGAA CCGGCGACGA CGATGCGCTG TTCCGCCTGC TCGACTCGCT CAAATGCGAC GACATCGTGC CGCTCGGCTC GGCATTCGCG AGCTATTCGC TGTTCCCGAT GAGCAGCCTG TGGCGCCAGG TGGCGTCGGC CGCTCGCCAC ATGGACCGCA CCAAACTGCT CGAAGGCTTG CCGCCCGGCA ACGAAGCACT GCGCCGCCAG ATCGCGTTGC GCTATCTGAA CGCGGGCGCG TCGCTGCCGC TGGAGGAAAT CGTCATCACG ACGGGCGCGA CCGAAGCGCT GACGCTCAGC TTGCAGGCGC TGACGCGCCC GGGCGACATC GTCGCGATCG AACGGCCGGC CTTCCACGCG GTGCTGCAGG CCGTCCAGTG CCTGCATCTG AAGGCCGTCG AGATTCCGGT CGACCCGCGC ACGGGCCTCG ACCTCGACGC GCTCGCCGAG GCGCTCGACA CGCATCCGGT ACGCGCATGC TGGTTCATGA CGTCATTCCA CAACCCGACC GGCGCGACGC TGACCGACGA GCGCAAGCGC GCGCTGATCG ACCTGCTCGC GTCGCGCGGC GTGCCGCTGA TCGAGGACGA CGTGTATGGC GAACTGCAGT TCGGCACGGC GCCCACGCGG CCCGCGAAAC TGTATGACGA CAGCGGACTC GTCCTGCATT GCGGATCGTT CTCGAAATGT CTCGCGCCCG GGTTCCGAAT CGGCTGGGTC GCGGCCGGCC GCTTCGTCCG GCAGATCCGC GAGGCCAAAG GCACGAGCAC GCCGGCCGCC GACGTACCTG CGCAGATGGC GATAGCGAGC TATCTGCGCG ACGGCGCATA CGACCGGTTC CTGCGCAAGC TGCGACGCAA TCTCGCCGCG CACCAGGCGC AAATGCTGTC GGCCGTGCGC GCGTATTTCC CGACGGATAC CGAAGTGTTC GCGCCGCGCG GCGGGTATTT CCTTTGGATC GAATTGCCGC CGCACCTGGA CGCGATGCAC CTGTTCGACG ACGCGATGGA AAGCGGCGTC AGCATTGCGC CCGGGCCGAT CTTCTCCGCC ACCGGCGGTT TTCGCCGCTA TTTGCGGCTC AACTACGGGC GGCCGTGGAC CCCGGCCGTC GAGCGCGCGC TGGAGACGCT CGGCACGCTC GCGGCCCGGC AGCGGCACGG CGGCTAG
|
Protein sequence | MKRYAVLAQT IADAIRRGDL AAGARIPTVR AACRAYRVSP STVFRAYYAL ESEGLIVARA RSGYFVANVA DKHVRFGRDS PRKPGAAQND AARTGDDDAL FRLLDSLKCD DIVPLGSAFA SYSLFPMSSL WRQVASAARH MDRTKLLEGL PPGNEALRRQ IALRYLNAGA SLPLEEIVIT TGATEALTLS LQALTRPGDI VAIERPAFHA VLQAVQCLHL KAVEIPVDPR TGLDLDALAE ALDTHPVRAC WFMTSFHNPT GATLTDERKR ALIDLLASRG VPLIEDDVYG ELQFGTAPTR PAKLYDDSGL VLHCGSFSKC LAPGFRIGWV AAGRFVRQIR EAKGTSTPAA DVPAQMAIAS YLRDGAYDRF LRKLRRNLAA HQAQMLSAVR AYFPTDTEVF APRGGYFLWI ELPPHLDAMH LFDDAMESGV SIAPGPIFSA TGGFRRYLRL NYGRPWTPAV ERALETLGTL AARQRHGG
|
| |