Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_3234 |
Symbol | |
ID | 4096176 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008061 |
Strand | + |
Start bp | 298258 |
End bp | 304260 |
Gene Length | 6003 bp |
Protein Length | 2000 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638016533 |
Product | alpha-2-macroglobulin-like |
Protein accession | YP_623102 |
Protein GI | 107025591 |
COG category | [R] General function prediction only |
COG ID | [COG2373] Large extracellular alpha-helical protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATTTGC TGCGCTTCCT GCTGCTCCTG CCGATTCGCG TGGCGGGCTT CGTCTGGTGG CTGCTCGGCT GTGCGTTGCG GCCGCTGGTC GGCGACGTGT CGTGGACGGC GCCCGCATGG ATGGGCGTCA CCGCCGCGGC CGTGCGCCGC CGTCCGTGGC ATGCCGGCGG CCTCGTGCTG CTCGCGGCTG CGCTCGGTTA CGGCGGCTAC TGGTTCAAGC ATCGCCCGAA GCCGCCCGAG CCTGAAACCG TCGGCTTCAC CGTGAAGGCG CCGGCGATCA CGACCTACGA GGTCGACGAT GCCGACAAGC CGAAGATCAC CGTGCACCCG CTGGAAGTGG CGTTCTCGCA ATCGGCCGCG CCGATCGAGC AGGTCGGCAA GCCGGCCGGT GACGGCATCG AGATGACGCC GGCGCTGAAG GGCGCGTGGG AGTGGGCCGA CGACAAGACG CTGCGCTTCA CGCCGGTGGC CGACTGGCCG GTCGGCGCGC ACGTCGAGGT GCGCTTCGCC GTGCATCGCG TGTTCGCGCC GCAGGTGACG ATGCACGACG ACCGTTTCGC GTTCGACGTG CCGGCGTTCG CCGCGACGTT CGGCGACAAC CAGTTCTACC AGAACCCCGA CAATCCGGCG GAGAAGCAGG CGCTGCTGCA GTTGCGCTTC AACTACCCGG TCGATCCGGC CGAGTTCGAG AAGCGCATCG ACCTCGTGCT GGTCGGCCGC GACGGCAAGA CCGTGTCGCC GCTGCGCTAC ACGGTCAACT ACGACAAGAT GAAGACGAGC GCGTGGGTCC ACTCGCAGCC GCTCGAGATT CCGCGCGATC CGCTCGCGGT GCGGCTCGAC GTCGACAAGG GCGTGAAGAG CGCGCGCGGC GGCAACGGCA CGCCGGACGT GCTGCATGCG TCGGTCGGCG TGCCGGGGCT GTACAGCCTG TCGATCGGCA ATATCGCGCC GACGCTGGTC GACAACGAGC GCTACGAGCC CGAGCAGGTG CTCGTCGCGG AAACCTCCGA CGGCGTGCGC GGCGCCGACC TGGCCGCACG CGCGAAGGCG TGGGTGTTGC CGAAGCGCAA GCCGGGTGTC GAGCAGGCGG ACGACGATCC GCCGTACGAA TGGAACGTGG CCGACATCAG CGACGCGGTG CTGAAGCAGT CGAAGCCGCT GCCGCTCGAC GTCGTGCCGA CCGAGAACGA CTTCGCGACG CTGCAGAGCT TCAAGTACCA CGCGACGCCG GGCGAGCGCG TCGTCGTGCG CTTCGAGGGC GACCTGAAAT CGACCGGCGG CTACCGGCTC GGCGCGCCGG TGACGAACGC CTTCACGGTG CCCGACTATC CGAAGCTGCT GCGCTTCATG GCCGACGGCT CGCTGCTGTC GATGAGCGGC AGCAAGCGGC TGTCGGTCGT GTCGCGCAAC CTGCCGGGCA TGAAGGTCGA GATCGGCCGC GTGCTGCCCG ACCAGATCCA GCATCTCGTG AGCTTCAACA ACGGCACGTA CGCGCGGCCC GAGCTGTCGT ATTCGTTCAG CGAGGATCAC ATCGTCGAGC GCTTCGTGCA GACCCGCGCG TTCCCGGCCG GCGATCCCGG CCGTGCACAT TACGAAGGCA TCGACCTCGG CCAGTACCTG AAGGACGGCA AGCGCGGCGT GTTCCTGCTG CATCTGTCGA AGTACGATCC GGCGGCCGAG AAGAAGAAAG CCGACGACGC GAAGGGCAGT GATTCGGCAT CGGATGACGG CAGCCAGGAT CAGTCCGACA ACGCCGATTC CGGCGACAGC AGCGGCAACG GCGACGACGG CGACAACGCG CTCGGCGACA CGCGCCTGAT CGTCGTGACC GATCTCGGGA TGCTGGTCAA GAAGGCGCTG GATGGCAGCC AGGACGTATT CATCCAGTCG ATCCGCACGG GCCGCCCGGT TGCGGGCGCA ACCGTATCGG TGCTCGCGGT GAACGGCCAG GCGCTGTTCA CACAGACCAC GAGCACCGAC GGCGTCGTGC ATTTCCCCGC GTTCAAGGGG CTCGACCGCG AGAAGCGTCC GCAGCTGTAC GTCGTGAAGA AGGACACCGA TCTGTCGTTC CTGCCGGTGG CCGGCCGCGA CCGCCAGCTC GACTTCTCGC GCTTCGACGT CGACGGCGAG CGCAACGCGA CGGGCCAGGG GCAATTGTCC GCGTACCTGT TCTCGGATCG CGGGCTGTAC CGGCCCGGCG ATCCGTTCCA CATCGGCCTG ATCGTGCGCG CGGCCAACTG GGCGCGCAGC CCGGCCGGCG TGCCGCTGCA GGCGGAGATC GTCGACCCGC GCGGGATGAC CGTCGAGCGT AAGCCGGTAA CCGTCGACGC GACGGGTTTC ACCGAGCTCG GCTACACGAC CGCCGAAACG GCGCCGACCG GAACGTGGAC GGTCAACCTG TATATCGTCA AGGACGGCCA GCCGGGTGCC GAGCCGATCG GCAGCACGAC GGTGCAGGTG AAGGAATTCC TGCCCGACCG GATGAAGGTC GACGCGAAGC TGTCGCAGCA GGTCGTCGAA GGGTGGGTGA AGCCGAAGGG GCTGAAGGGC CTCGTCGATG CGCAGAACCT GTTCGGCACG CCGGCCGAGA AGCGCCGCGT CGCGGCGACG CTGACGCTGC GTCCCGTGTG GCCGTCGTTC CGCAGCTGGC AGGGGTATCA CTTCTTCGAC GCACGCCGCG CGAAGGAGGG CTATACGACC ACGTTGCAGG ACGGCACGAC CGACGACAAG GGCCATGCCG AGTTCGATCT CGATCTCGAC AAGTACGCGG ACGCGACCTA TCAGCTCTAC TTCCAGGCGA AGGCATACGA AGCGGAAGGC GGGCGCAACG TCGCCGCGAA CGCGCAGACG CTCGTGTCGA ACAACGACTG GCTCGTCGGC TACAAGTCGG TCGACGATCT CGGCTACGTG AAGCGCGGCA GCCCGCGCAC GGTGCGGCTC GTCGCGATCG ACCCCCGCGC GAAGGCGATC GACGTGAAGG ACCTGCGCGC GCAGCTCGTC GAGCAGCGTT ACGTGTCGGT GCTGACCAAG CAGGATTCCG GTGCATACAA GTACGATTCG CGGCTGAAGG AAGTGCCGGT CGACGAGAAG CCGCTGTCGA TTCCCGCAGC CGGGCTCGAC TACGCGCTGC GCACCGACAA ACCGGGCAGC TATGCGCTCG TGATCCGCCG CGCGGATGGC GCGGCGGTGA ACCGGATCGA GTATTCGGTC ACGGGCGCCG CGAACGTCAC GCGTTCGCTC GACCGCAACG CGGAGCTTCA GGTGAGTCTC GCGAAGCACG ACTTCAAGCC GGGCGAGCAG GTCGAGATCG CGATCCGTGC GCCGTATGCG GGTAGCGGCC TGATCACGAT CGAGCGCGAC AAGGTGTATG CACATGCGTG GTTCCATGCG GACACGACGA GTTCTATCCA GCACATCACG GTGCCGGCCG GCTTCGAAGG CAACGGCTAC ATCAACGTGC AGTACATCCG CGATCCGTCG TCGGACGAGA TCTTCATGAG CCCGCTGAGC TACGGCGTCG TGCCATTCTC GGTGAACCTC GACGCGCGCC GCAACGCGGT GAGCGTCGAC GCGCCGGCGC TCGTGAAGCC GGGCGATACC GTCAACTTCA CCGTGCATTC GGCGAAGCCC GCGAAGGTCG TCGTGTTCGC GGTCGACGAG GGCATCCTGC AGGTCGCGCG CTACAAGCTC GGCGATCCGC TGAAGTTCTT CTTCCGCAAG CGGATGCTCG AAGTCGGCAC GTCGCAGATC CTCGACCTGA TCCTGCCGGA CTTCGAGAAG CTGATGGCGA TGGCCGCGCC CGGCGGCGAC GCCGACGACG CGATCGGCCG CCAGCTGAAT CCGTTCAAGC GCAAGCGCGA CAAGCCGGTC GTCTACTGGT CGGGGATCGT CGACGTGAAC GGCGACACGC GGCTGAGCTA CACGGTGCCC GACTACTTCA ACGGGAAGTT GCGCGTGATG GCCGTGTCGG TGTCGCCGGA TCTGGTCGGC ACGTTCGAAG GCGCGACGAC GGTGCGCGGC GATTTCGTGC TGTCGCCGAA CGTGCCGACG ACGCTCGCGC CGGGTGACGA GGCCGACGTC AGCGTCGGCG TCGCGAACAA CCTGACGGGC GTCGGCAACC AGCCGGTGCC GGTCGCGGTC ACGCTGAAGA CGGGCCCGCA GTTGCAGGTG ATCGGGCCGG CGACGCAGAA CGTCGCGCTC GCGCCGCAGC ACGAAGGCGT CGCGCTGTTC CGCGTGAAGG TGACCGACAC GCTCGGCTCG GGCGCGCTGT CGTTCGGCGC GCGCTACGGC GCGAAGGGCG CGCAGCAGCG TGTCGACGTG TCGGTGCGGC CGGCCGCCGC GTTCCGCACG CAGCTCGACA TCGCGCGGCT CGACCCGGGC AAGAAGGCCG GCGTGCCGAA CCTGCGGTCG ATGTACGACG CATACGCGTC GCGCGACGCG AGTATCTCGA CCGCGCCGCT GGTGCTGTCC GAAGGGCTGT CGTCGTATCT CGTCAACTTC GAGCACGCTT GCAGCGAGCA GATGGTGAGC GCGGCCGTGC CACGCATGTT CGCGGCGAAA TGGCTGTCGG TGCGCGCGCT GACGAGCGCG ATGCATGCGC CCGAGGCCGG CGCCGATGCG GCCAATGCGA GCGCGATCGC GCAGTTCGTC GGCGTGCTGC GCAGCCGGCA GAACGCGCAG GGCGGCTTCG GCCTGTGGAG CGCGACGCCC GATGCCGATC CGTTCGTGTC CGCGTATGCG ATGCACGTGC TGCTCGACGC GCGAGATCGC GGCGTCGCGG TGCCGAAGGA CATGCTCGAC GCGGGCAACG CGTACTTGCA GCGGCTCGCC GCGAACGACT CGCTCGGCTC GCTCGATCTG CTACGGCAGC GCGCATACGC GGTGTACCTG CTGACGCGCC AGGGCAACGT GACGACCAAC AGCCTCGCGG CCGTGCAGAA GCGGTTGCAG GCGGCCTATC CGAACGACTG GCGCAATGAT CTCGCGGCCG CGTGGCTCGC CGCGTCGTAT CAGTTGCTCA AGCAGGACAA GGAAGCCGCC GCGCTGATCG CGGGCCCGCA GGCATTGCTC GAACGCAAGC GCGCGTCCGA CGGCGACTAT TCGACCGGCT ACTACATCGA CCCGCTGACG CGCGACGCGA GCGTGCTGTA CCTGCTCGCG AAGCACTTCC CGGAGCGCGT GCGCAAGCTG TCGCCGCGCG CGATGGACAA CCTCGCCGCG CCGCTCGTCG ACAACCGCTA CAACACGCTG TCGTCGGCGA TGACGATTCT CGCGCTCGAC GCGTATGCGG CATCGAACGT GGGCCAGCTC GACCAGCTTG CGATCAACGA AGTGCGCGCG GGCGCCGCGC CGAAGGACGT ATCGTCGATC CAGGCGAACC TCGTGCGCTC GGGCACGTGG GCGGCCGGCG CGTCGCGGGT CGACTTCGTG AACGGCAGCA CGTTGCCGGC GTGGTGGGTC GCGAGCCAGT CGGGCTACGA CCGCGGCACG TCGACGAAGG CGATCAGGAA CGGGCTGGAG ATCGTGCGCG ACTACACGGA TACCGACGGC AAGCCGCTCG CGAGGATCGC GCTCGGCCAG GAGATCGACG TGCACCTGAA GATCCGTGCG ACCGGTTCGG CGAACGTCGG CAACGTCGCG ATCGTCGACC TGCTGCCGGG CGGCTTCGAT CCGGTGATCG CGCCGCCCCC CGCGACCGAT ACGCAGGAGG GGGACGGCAA CGGCGACGGC AGTGCGTCGG CGCCGGTGGC CGATGCGCCG TGGCATTCGC CGATCGGCGT GAAGGGCTCG ACGTGGCAGC CGCAGTTCGC CGATATCCGC GAGGATCGCG TGGTGATCTA CGGCACCGCG ACGACCGACG TGCGCGAGTT CGTCTACCGG ATCAAGGCGA GCAACGCGGG CCGCTTCGTT GCGCCGCCGG CCTACGGCGA ATCGATGTAC GACCGCCGCG TGCAGGCGCA GGCGCCGGGC GGCACGGCAC TGACGGTGGA GCGTGTGCGA TGA
|
Protein sequence | MDLLRFLLLL PIRVAGFVWW LLGCALRPLV GDVSWTAPAW MGVTAAAVRR RPWHAGGLVL LAAALGYGGY WFKHRPKPPE PETVGFTVKA PAITTYEVDD ADKPKITVHP LEVAFSQSAA PIEQVGKPAG DGIEMTPALK GAWEWADDKT LRFTPVADWP VGAHVEVRFA VHRVFAPQVT MHDDRFAFDV PAFAATFGDN QFYQNPDNPA EKQALLQLRF NYPVDPAEFE KRIDLVLVGR DGKTVSPLRY TVNYDKMKTS AWVHSQPLEI PRDPLAVRLD VDKGVKSARG GNGTPDVLHA SVGVPGLYSL SIGNIAPTLV DNERYEPEQV LVAETSDGVR GADLAARAKA WVLPKRKPGV EQADDDPPYE WNVADISDAV LKQSKPLPLD VVPTENDFAT LQSFKYHATP GERVVVRFEG DLKSTGGYRL GAPVTNAFTV PDYPKLLRFM ADGSLLSMSG SKRLSVVSRN LPGMKVEIGR VLPDQIQHLV SFNNGTYARP ELSYSFSEDH IVERFVQTRA FPAGDPGRAH YEGIDLGQYL KDGKRGVFLL HLSKYDPAAE KKKADDAKGS DSASDDGSQD QSDNADSGDS SGNGDDGDNA LGDTRLIVVT DLGMLVKKAL DGSQDVFIQS IRTGRPVAGA TVSVLAVNGQ ALFTQTTSTD GVVHFPAFKG LDREKRPQLY VVKKDTDLSF LPVAGRDRQL DFSRFDVDGE RNATGQGQLS AYLFSDRGLY RPGDPFHIGL IVRAANWARS PAGVPLQAEI VDPRGMTVER KPVTVDATGF TELGYTTAET APTGTWTVNL YIVKDGQPGA EPIGSTTVQV KEFLPDRMKV DAKLSQQVVE GWVKPKGLKG LVDAQNLFGT PAEKRRVAAT LTLRPVWPSF RSWQGYHFFD ARRAKEGYTT TLQDGTTDDK GHAEFDLDLD KYADATYQLY FQAKAYEAEG GRNVAANAQT LVSNNDWLVG YKSVDDLGYV KRGSPRTVRL VAIDPRAKAI DVKDLRAQLV EQRYVSVLTK QDSGAYKYDS RLKEVPVDEK PLSIPAAGLD YALRTDKPGS YALVIRRADG AAVNRIEYSV TGAANVTRSL DRNAELQVSL AKHDFKPGEQ VEIAIRAPYA GSGLITIERD KVYAHAWFHA DTTSSIQHIT VPAGFEGNGY INVQYIRDPS SDEIFMSPLS YGVVPFSVNL DARRNAVSVD APALVKPGDT VNFTVHSAKP AKVVVFAVDE GILQVARYKL GDPLKFFFRK RMLEVGTSQI LDLILPDFEK LMAMAAPGGD ADDAIGRQLN PFKRKRDKPV VYWSGIVDVN GDTRLSYTVP DYFNGKLRVM AVSVSPDLVG TFEGATTVRG DFVLSPNVPT TLAPGDEADV SVGVANNLTG VGNQPVPVAV TLKTGPQLQV IGPATQNVAL APQHEGVALF RVKVTDTLGS GALSFGARYG AKGAQQRVDV SVRPAAAFRT QLDIARLDPG KKAGVPNLRS MYDAYASRDA SISTAPLVLS EGLSSYLVNF EHACSEQMVS AAVPRMFAAK WLSVRALTSA MHAPEAGADA ANASAIAQFV GVLRSRQNAQ GGFGLWSATP DADPFVSAYA MHVLLDARDR GVAVPKDMLD AGNAYLQRLA ANDSLGSLDL LRQRAYAVYL LTRQGNVTTN SLAAVQKRLQ AAYPNDWRND LAAAWLAASY QLLKQDKEAA ALIAGPQALL ERKRASDGDY STGYYIDPLT RDASVLYLLA KHFPERVRKL SPRAMDNLAA PLVDNRYNTL SSAMTILALD AYAASNVGQL DQLAINEVRA GAAPKDVSSI QANLVRSGTW AAGASRVDFV NGSTLPAWWV ASQSGYDRGT STKAIRNGLE IVRDYTDTDG KPLARIALGQ EIDVHLKIRA TGSANVGNVA IVDLLPGGFD PVIAPPPATD TQEGDGNGDG SASAPVADAP WHSPIGVKGS TWQPQFADIR EDRVVIYGTA TTDVREFVYR IKASNAGRFV APPAYGESMY DRRVQAQAPG GTALTVERVR
|
| |