Gene Bcen_3166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_3166 
Symbol 
ID4095367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp222318 
End bp223256 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content60% 
IMG OID638016466 
ProductAraC family transcriptional regulator 
Protein accessionYP_623035 
Protein GI107025524 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAATCG GGACTCAGGC TGTGTTCGAG ATTGCGAACG TCGTAGCAAA AGAGCAGATT 
TACCATCTAA CGAATGTTTC CGTCGCCGGC GGGCCGGTTC GTTCGTCGCT CGGTCTTTCG
GTTCTGACTG AACCCGCAAA CACGGCCGCT GCAGCCGATA CATGGATGAT CGGAGGTGTG
ATTAATCCGG GCACCCGGAC CTCATCGGCC GCCGAACTTC AATTCATCAA AGAGATTGGC
AGCAGTGCCC GGCGCGTGGC CGGGCTATGT ACAGGTGCGT TCATCCTCGG CGAGGCGGGC
CTGCTCAATG GAAGACGTGC CACAACCCAC TGGGCCTATG CAGACGAACT GCAACGGCGC
TTGCCGCTTG CCCAAGTCGT GCGCGACTGG ATCTTTATTA CCGATGGCCC GATTTGGACG
TCCGCCGGGC TGACTGCAGC CATGGATCTC GCGCTCGGTA TGGTGGAAGA AGATATCGGC
CCCGAGTTTG CGAACTCGGT TGCGCGTGCA CTCGTGATGA ATCAACGACG TTCGGGCCGG
CAATCGCAAC AATCCGAGTT GCTGGCACTA GCTCCCAAGT CCGACCGGAT ACAACTCGCG
CTCGAATACG CCCGCGCCAA TCTGGCAGAG CCCTTGCGCG TCAGCGATCT CGCACGAGCC
GCACATATCA GCACTCGGCA ATTCGCGCGC ATCTTCCTCG CGGAGACTGG CGAGTCTCCT
GCCAACGCGA TCAAGCGGCT GCGACTCGAA GCGGCAAGGG TCCTGATCGA GCGTGGCCGG
CATACGCTCG ATACCATTGC ACGCGAAACG GGATTTCGCG ACCGCAATCA CCTCCGCGAA
GCGTTCGTTC GCAGTTACGG CCTGACTCCT CAGGCGGTGA GAAGATCCGT TCGCAATTCG
ATCGAAGATC AGCCCGAGGA ACTAAGCGAA GCTGCCTGA
 
Protein sequence
MAIGTQAVFE IANVVAKEQI YHLTNVSVAG GPVRSSLGLS VLTEPANTAA AADTWMIGGV 
INPGTRTSSA AELQFIKEIG SSARRVAGLC TGAFILGEAG LLNGRRATTH WAYADELQRR
LPLAQVVRDW IFITDGPIWT SAGLTAAMDL ALGMVEEDIG PEFANSVARA LVMNQRRSGR
QSQQSELLAL APKSDRIQLA LEYARANLAE PLRVSDLARA AHISTRQFAR IFLAETGESP
ANAIKRLRLE AARVLIERGR HTLDTIARET GFRDRNHLRE AFVRSYGLTP QAVRRSVRNS
IEDQPEELSE AA