Gene Bcen_3108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_3108 
Symbol 
ID4095880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp145870 
End bp148101 
Gene Length2232 bp 
Protein Length743 aa 
Translation table11 
GC content70% 
IMG OID638016408 
Productpeptidoglycan glycosyltransferase 
Protein accessionYP_622977 
Protein GI107025466 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG5009] Membrane carboxypeptidase/penicillin-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAACCACT TCGTGCCGTT TCTCCGAGAC GCGTGGCTCC GTTGCCGCGC CCGTGTCACG 
CCGCTCGCCG CCGCGTGCCG CACGCGCGTC CGCGCGCTGG GCGCGGGCAT GCTCCACCGC
CTGCGCCATC CGACCCGGCG CGGCGTCGCG CTGACGCTTG CCGCGATCCC GGTGCTGGGT
CTGCTCGTCC TGCTCGCGTT CGTTCCGTTC ACGCCGAGCA TCGGCGACAT CCGCAAGGCG
CGCATCGACC GCCCCGCGCG CGTGCTGTCG GCCGACGGCC AGCTGATCGC CGAATTCCGG
CCGGTAAACC GCGAATGGGT GCCGCTCAAG CAGATCTCGC CGCACATGAT CGATGCGCTG
ATCGCGACCG AGGACCACCG CTTCTACGCG CATCACGGCA TCGACTGGCG CCGCACGCTC
GCGGCCGGCC TGCATACGTT CTCGGGCGAC CGGCAGGGCG GCTCGACGAT CACGCAGCAG
CTGGCGCGCA ACCTGTATCC CGACGAAGTC GGCCGCGCGC CGACGCTCAC GCGCAAGGTG
AAGGAGCTGA TCACCGCGTT CAAGATCGAA GCGGTGTACA GCAAGGACGA GATTCTCGAA
ACCTACCTGA ACACGGTGCC GTTCCTGTAC AACGCGTACG GCGTCGAAAT GGCCGCGCGC
ACCTACTTCG GCAAGTCGGC GGACCAGCTC GACCTCACGG AAAGCGCGAC GCTCGTCGGG
ATGCTGAAGG GCAACAGCTA CTACAACCCG GTGCTGAATC CGGAACGCGC GGTCCAGCGG
CGCAACGTCG TGCTCGGCCG GATGGCGCAG ATGGGCATGC TGTCGCCGCA GCAGTTCGCG
AAACTGCAGC GCCAGCCGCT GCGCGTCGAC TTCGAACCGC AGACGTCACA GCCCGGTCTC
GCGCCGCATT TCGCGGTGCA ACTGCGCAAG TGGCTGATCG CGTGGGCCGA CCGCAACAAC
TATGATCTCT ACTCCGACGG CCTCGTCGTG CGCACGACGC TCGATGCGCG GCTGCAGGAC
ATGGCCACGC AGGCGCTGAC GCGGCAGACC GAACGGCTGC AGGCGATCGC CGACGGCGCA
TGGCGCGGGC CGTCCGGCTG CGGGCTGCGC AACGACCTGT TCCGCGGCTT CATGCGTCAG
ACACCGGAGT ATCGGCAGGC CCGCGACACC GGGCTCGCCG ACGTGGTTGC GCTGAAGCAG
CTCGGCGCGA ATCGCGAATT CGTGCGGGCG CTGTGCGAGC GCAAGACGCA GGTGCAGGCC
GGCTTCGTCG CGATCGATCC GCGCAACGGC GCGATCCGTG CGTGGGTCGG CAGCCCCGAT
TTCGGCAGCG AGCCGTTCGA TCATGTGGTA CAGGCACGGC GTCAGCCGGG TTCGACGTTC
AAGCCGTTCG TCTATGGCGC CGCGTTCGCG GACGGCATGC GGCCGAGCGA CACGTTCGTC
GACGGCCCCG TCGCGATCCC GATCGACGGC CGCGCCGTGT GGTGGCCGAC CGATGCGGAG
CCGCCGACCG GCGCGCCGAT GACGCTGCGC GACGGGCTGG CGCTGTCGCG CAACCGCATC
ACCGCGCAGG TCATGCAGCG GGAAGGCGCG GCGAAGGTCG CGCAGCTTGC CCGCGCGATG
GGCGTGCGCG ACAGCCCGCT CGACGCGGTG CCGTCGCTCG CGCTCGGCAC GAGCCCGGTC
ACGCTGAAAG AGATGGTGTC CGCGTACGGC ACGATCGCGA ATCGCGGCGT GTACGTCGCG
CCGCAGATGA TCACGCGCAT CGAGGATCGC GACGGCAAGG TGCTCGCCGC ATTCGGCAGC
GCGCCGCCGG AACGCGCGCT GTCGGCGCCC GCCGCACTGA CGCTCGTCGA CGCGATGCGC
GGCGTCGTCG ATTACGGGAC CGGCGCGGAC ATCCGCTCGC GCTACGGGAT TCGCATCGAC
GTCGCGGGCA AGACCGGCAC GACGCAGGAC AACACCGACG GCTGGTTCAT CCTGATGCAT
CCGCAACTGG TGGCCGGCGC GTGGGTCGGC TTCGACGACG GCAGCGTGAC GCTGCGCAGC
GACTACTGGG GCGCGGGCGC GCACAGTGCG CTGCCGATCG TCGGGTCGTT CTACGATGCG
GCGCTGCGCG CGCGGGCAAT CGATCCGCAT GTGCAGTTCT CGCCCGATTT CCGGCCACGC
AGCGCGCCAG CGCCGAAGCG GCGCGCGCCG CAGCATTCAG GCCTGTTCGA CTGGCTGCGC
TTCTTCCGAT GA
 
Protein sequence
MNHFVPFLRD AWLRCRARVT PLAAACRTRV RALGAGMLHR LRHPTRRGVA LTLAAIPVLG 
LLVLLAFVPF TPSIGDIRKA RIDRPARVLS ADGQLIAEFR PVNREWVPLK QISPHMIDAL
IATEDHRFYA HHGIDWRRTL AAGLHTFSGD RQGGSTITQQ LARNLYPDEV GRAPTLTRKV
KELITAFKIE AVYSKDEILE TYLNTVPFLY NAYGVEMAAR TYFGKSADQL DLTESATLVG
MLKGNSYYNP VLNPERAVQR RNVVLGRMAQ MGMLSPQQFA KLQRQPLRVD FEPQTSQPGL
APHFAVQLRK WLIAWADRNN YDLYSDGLVV RTTLDARLQD MATQALTRQT ERLQAIADGA
WRGPSGCGLR NDLFRGFMRQ TPEYRQARDT GLADVVALKQ LGANREFVRA LCERKTQVQA
GFVAIDPRNG AIRAWVGSPD FGSEPFDHVV QARRQPGSTF KPFVYGAAFA DGMRPSDTFV
DGPVAIPIDG RAVWWPTDAE PPTGAPMTLR DGLALSRNRI TAQVMQREGA AKVAQLARAM
GVRDSPLDAV PSLALGTSPV TLKEMVSAYG TIANRGVYVA PQMITRIEDR DGKVLAAFGS
APPERALSAP AALTLVDAMR GVVDYGTGAD IRSRYGIRID VAGKTGTTQD NTDGWFILMH
PQLVAGAWVG FDDGSVTLRS DYWGAGAHSA LPIVGSFYDA ALRARAIDPH VQFSPDFRPR
SAPAPKRRAP QHSGLFDWLR FFR