Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_3082 |
Symbol | |
ID | 4095991 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008061 |
Strand | - |
Start bp | 112368 |
End bp | 113693 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638016382 |
Product | major facilitator transporter |
Protein accession | YP_622951 |
Protein GI | 107025440 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2211] Na+/melibiose symporter and related transporters |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGGACTT CCGTCAAGCA GCCGAAGCGG GCGGCGCTCG CTTCGTTCGT CGGCACCACG ATCGAGTGGT ACGACTTCTA TAGTTATGCG ACCGCCGCCG CCATCGTATT CGGGCCGCTG TTCTTCCCCG GCGAAAACCG CTTCATCAGC CTGCTCGCGT CGTTCGGCTC GTTCGCGGTC GGCTTCTTCG CGCGGCCGCT CGGCGGCGTA ATGTTCGGCT ATCTCGGCGA CCGCTTCGGC CGCAAGCGGT CGCTGCTCGC GACGCTGATG CTGATGGCCG TGTCGACGGT CGCGATCGGC CTGCTGCCCA CCCATGCGCA AGCCGGCGTG ATCGCACCGA TCCTGCTGGT GCTGATGCGC GTGCTGCAAG GCATCGCGGT GGGCGGCGAA TGGGGCGGCG CGGTGCTGCT GGCCGGCGAG CATGCGCCCG AAGGCAAGCG CACGTTCTTC GCGTCGTTCG CGCAGCTCGG CAGCGCGAGC GGCCTGATCC TGTCGATGCT CGCGTTCGGC GCGGTCAGCA CGCTGTCGAA GGACGACATG ATGAGCTGGG GCTGGCGCGT GCCGTTCCTC GCGAGCTCCG TGCTGCTGAT CGTCGGCTTC GTGATCCGCG CGAGCGTGTC GGAATCGCCC GAGTTCGAGG AAGTCAGGAA GAGCGGCAAC ATCGCGCAGA AACCGCTGCG CGAAGCGCTC AAGGTCTGGC CGCTGCTGCT GCTCGCGATC GGCGCGAACG TGTACGGTAT CGCCGGCGTG TATTTCAGCA ACATCTTCAT GATCAGTTAT GCGACGCAGT TCCTGTCGCT CGACCGCTCG ATGGTGCTGC ATTGCATGAC GATCGTCGCG GTGCTGCAGT TCGTCGTGCA GCTCGCGGCC GCATTCCTCG CGCAGCGCTT CGGCACCACG CGCGTGCTGC TGATCACCGG CGCGTGGGCG ATGATCGTCC CGTTCGTGAT GCTGCCGCTC GTGCACCTGG GCACGCCGGT GTCGATCACG GTCGGCGTCG GCCTCGCGAC GCTCGCGGAA TCGGGCTACT ACTCGGTCGT CGCGGGCTTC GTCAGCGGCA TCTTCGTCGC GCGGATTCGC TATACGGCGA TCTCGATCGC GTACCAGGTG TGCGGCGCGC TCGCCGGCGG CCTCACGCCG CTGGTCGCGA CCATCATCGC GCAGAACACC GCGCCGCAAT GGTGGCCGCT CGCGATCCAG TACGCGAGTG CCGCCGTGCT GTCGTCGCTG TGCGTGTGGC TGATCTCGCG CCGTGTCAGC ATCGACGATG CGGGCGCGCC CGGCAAGACG GACGACGCGC TGCCGCGCGG CACGCGCACC GCGTAG
|
Protein sequence | MGTSVKQPKR AALASFVGTT IEWYDFYSYA TAAAIVFGPL FFPGENRFIS LLASFGSFAV GFFARPLGGV MFGYLGDRFG RKRSLLATLM LMAVSTVAIG LLPTHAQAGV IAPILLVLMR VLQGIAVGGE WGGAVLLAGE HAPEGKRTFF ASFAQLGSAS GLILSMLAFG AVSTLSKDDM MSWGWRVPFL ASSVLLIVGF VIRASVSESP EFEEVRKSGN IAQKPLREAL KVWPLLLLAI GANVYGIAGV YFSNIFMISY ATQFLSLDRS MVLHCMTIVA VLQFVVQLAA AFLAQRFGTT RVLLITGAWA MIVPFVMLPL VHLGTPVSIT VGVGLATLAE SGYYSVVAGF VSGIFVARIR YTAISIAYQV CGALAGGLTP LVATIIAQNT APQWWPLAIQ YASAAVLSSL CVWLISRRVS IDDAGAPGKT DDALPRGTRT A
|
| |