Gene Bcen_3082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_3082 
Symbol 
ID4095991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp112368 
End bp113693 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content68% 
IMG OID638016382 
Productmajor facilitator transporter 
Protein accessionYP_622951 
Protein GI107025440 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2211] Na+/melibiose symporter and related transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGACTT CCGTCAAGCA GCCGAAGCGG GCGGCGCTCG CTTCGTTCGT CGGCACCACG 
ATCGAGTGGT ACGACTTCTA TAGTTATGCG ACCGCCGCCG CCATCGTATT CGGGCCGCTG
TTCTTCCCCG GCGAAAACCG CTTCATCAGC CTGCTCGCGT CGTTCGGCTC GTTCGCGGTC
GGCTTCTTCG CGCGGCCGCT CGGCGGCGTA ATGTTCGGCT ATCTCGGCGA CCGCTTCGGC
CGCAAGCGGT CGCTGCTCGC GACGCTGATG CTGATGGCCG TGTCGACGGT CGCGATCGGC
CTGCTGCCCA CCCATGCGCA AGCCGGCGTG ATCGCACCGA TCCTGCTGGT GCTGATGCGC
GTGCTGCAAG GCATCGCGGT GGGCGGCGAA TGGGGCGGCG CGGTGCTGCT GGCCGGCGAG
CATGCGCCCG AAGGCAAGCG CACGTTCTTC GCGTCGTTCG CGCAGCTCGG CAGCGCGAGC
GGCCTGATCC TGTCGATGCT CGCGTTCGGC GCGGTCAGCA CGCTGTCGAA GGACGACATG
ATGAGCTGGG GCTGGCGCGT GCCGTTCCTC GCGAGCTCCG TGCTGCTGAT CGTCGGCTTC
GTGATCCGCG CGAGCGTGTC GGAATCGCCC GAGTTCGAGG AAGTCAGGAA GAGCGGCAAC
ATCGCGCAGA AACCGCTGCG CGAAGCGCTC AAGGTCTGGC CGCTGCTGCT GCTCGCGATC
GGCGCGAACG TGTACGGTAT CGCCGGCGTG TATTTCAGCA ACATCTTCAT GATCAGTTAT
GCGACGCAGT TCCTGTCGCT CGACCGCTCG ATGGTGCTGC ATTGCATGAC GATCGTCGCG
GTGCTGCAGT TCGTCGTGCA GCTCGCGGCC GCATTCCTCG CGCAGCGCTT CGGCACCACG
CGCGTGCTGC TGATCACCGG CGCGTGGGCG ATGATCGTCC CGTTCGTGAT GCTGCCGCTC
GTGCACCTGG GCACGCCGGT GTCGATCACG GTCGGCGTCG GCCTCGCGAC GCTCGCGGAA
TCGGGCTACT ACTCGGTCGT CGCGGGCTTC GTCAGCGGCA TCTTCGTCGC GCGGATTCGC
TATACGGCGA TCTCGATCGC GTACCAGGTG TGCGGCGCGC TCGCCGGCGG CCTCACGCCG
CTGGTCGCGA CCATCATCGC GCAGAACACC GCGCCGCAAT GGTGGCCGCT CGCGATCCAG
TACGCGAGTG CCGCCGTGCT GTCGTCGCTG TGCGTGTGGC TGATCTCGCG CCGTGTCAGC
ATCGACGATG CGGGCGCGCC CGGCAAGACG GACGACGCGC TGCCGCGCGG CACGCGCACC
GCGTAG
 
Protein sequence
MGTSVKQPKR AALASFVGTT IEWYDFYSYA TAAAIVFGPL FFPGENRFIS LLASFGSFAV 
GFFARPLGGV MFGYLGDRFG RKRSLLATLM LMAVSTVAIG LLPTHAQAGV IAPILLVLMR
VLQGIAVGGE WGGAVLLAGE HAPEGKRTFF ASFAQLGSAS GLILSMLAFG AVSTLSKDDM
MSWGWRVPFL ASSVLLIVGF VIRASVSESP EFEEVRKSGN IAQKPLREAL KVWPLLLLAI
GANVYGIAGV YFSNIFMISY ATQFLSLDRS MVLHCMTIVA VLQFVVQLAA AFLAQRFGTT
RVLLITGAWA MIVPFVMLPL VHLGTPVSIT VGVGLATLAE SGYYSVVAGF VSGIFVARIR
YTAISIAYQV CGALAGGLTP LVATIIAQNT APQWWPLAIQ YASAAVLSSL CVWLISRRVS
IDDAGAPGKT DDALPRGTRT A