Gene Bcen_3003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_3003 
Symbol 
ID4095545 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp18578 
End bp20185 
Gene Length1608 bp 
Protein Length535 aa 
Translation table11 
GC content68% 
IMG OID638016298 
Productmethyl-accepting chemotaxis sensory transducer with Pas/Pac sensor 
Protein accessionYP_622872 
Protein GI107025361 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGGGG TCTCGAATCA ATCGACGAGC GGACGCAAGA TCCGCCACCC GGAGCTCCAC 
ACCATGCGCA ACAACCAGCC CGTCACGCAA CGCGAATTCG AATTTGCCGA CGATGCGACG
CTGATGTCGA CGACCGATGC CGACAGCTAT ATCACTTACG CGAACGCGGC ATTCATCCAG
GTCAGCGGCT TTTCTCCCGA GGAGATCGAA GGCCAGCCGC ACAACGTGGT GCGGCATCCG
GACATGCCGA AGGAGGCGTT CGCCGACATG TGGGCGACGC TCAAGGGCGG CGAGCCGTGG
ACCGCGCTCG TGAAGAACCG CCGCAAGAAC GGCGATCACT ACTGGGTGCG CGCGAACGCG
ATTCCGGTGA TGCGCAACGG GCAGCCGAAG GGCTACATGT CGGTGCGCAC GAAGGCGACG
CGCGACGAGA TCGCGGCCGC CGAGGCGCTG TATCGCGATT TCCGCGAAGG CAAGGCCGGC
AGCCGCCGGT TCCACAAGGG ATTGATCGTG CGCACGGGCG CGCTGCGCGT CGCGTCGCTG
TTCCAGACGA TGTCGGTGCG GGCGCGGCTG GTGTCGACGC TGTGCGTGCT GGCGCCGGCG
GTCGTCGGCG CCGGCTGGGC GGCCGGGTTG ACCGGAGGCG GGCTCGCGGC GTTCGCCGGT
GCGGCGGTCG GCGTGACGGC GGCGGCCGGG CTGTGGCTCG ACGCGCAGAT CGTGCGGCCG
CTGCGGCAGT TGCGCGACGA GGCGTTGCGC GTGGCGACCG GCGAGAGCCG CAGCGGCGTG
CGGATGAACC GCGTCGACGA GATCGGCATG ACGCTGCGCA CGATCAACCA GCTCGGGCTG
ATGTTCCGCT GGCTCGTCGA CGACGTCAGC GAACAGGTGC TGAACGTGCA GCGCGCGAGC
AATGAAATCG CGCAAGGCAA CAACGACCTG AGCGCGCGCA CCGAGCAGGC GTCGACGAGC
GTGCAGCAGA CGGCCGCGTC GATGGCCGAG ATGACGGCGA CCGTATCGAG CAATGCGGAG
ACGGCGCTGC AGGCGAACCA GTTGTCGGTG TCCGCGAGCG AGGCGGCCGG GCGCGGCGGG
CAGGCGGTGA ACGAAGTCGT CGCGACGATG AACGACATCA CCGACAGCTC GCGCAAGATC
GCGGACATCA TCGGCGTGAT CGACGGCATC GCGTTCCAGA CCAACATCCT CGCGTTGAAT
GCGGCGGTCG AGGCGGCGCG CGCGGGCGAT CAGGGGCGCG GCTTCGCAGT GGTCGCTGGT
GAAGTGCGCG CGCTCGCGCA GCGCAGCGCG AACGCGGCGA AGGAGATCAA GACGCTGATC
GGCGCGAGCG TCGAGCGCGT CGAGTCGGGT GCGCGGATCG TCGACGGCGC GGGCAAGACG
ATGGAGGACA TCGTCACGCA GGTGAAGCGC GTGTCGGATC TCATCGCGGA GATCAGCTCG
TCGACGGCCG AACAGAGCAC GGGCGTCGCG CAGGTCGACC AGGCGGTCGT GCATCTGGAC
AACATCACGC AGCAGAACGC GGCGCTCGTC GAGCAGAGCA CGGCGGCATC GGAAAGCCTG
AAGCAGCAGG CGGCGCGGCT GGTGGAGGCG GTGAACGTGT TCCGCTGA
 
Protein sequence
MRGVSNQSTS GRKIRHPELH TMRNNQPVTQ REFEFADDAT LMSTTDADSY ITYANAAFIQ 
VSGFSPEEIE GQPHNVVRHP DMPKEAFADM WATLKGGEPW TALVKNRRKN GDHYWVRANA
IPVMRNGQPK GYMSVRTKAT RDEIAAAEAL YRDFREGKAG SRRFHKGLIV RTGALRVASL
FQTMSVRARL VSTLCVLAPA VVGAGWAAGL TGGGLAAFAG AAVGVTAAAG LWLDAQIVRP
LRQLRDEALR VATGESRSGV RMNRVDEIGM TLRTINQLGL MFRWLVDDVS EQVLNVQRAS
NEIAQGNNDL SARTEQASTS VQQTAASMAE MTATVSSNAE TALQANQLSV SASEAAGRGG
QAVNEVVATM NDITDSSRKI ADIIGVIDGI AFQTNILALN AAVEAARAGD QGRGFAVVAG
EVRALAQRSA NAAKEIKTLI GASVERVESG ARIVDGAGKT MEDIVTQVKR VSDLIAEISS
STAEQSTGVA QVDQAVVHLD NITQQNAALV EQSTAASESL KQQAARLVEA VNVFR