Gene Bcen_2700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_2700 
Symbol 
ID4091452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp2966935 
End bp2968197 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content67% 
IMG OID638015986 
Productmajor facilitator transporter 
Protein accessionYP_622571 
Protein GI107024244 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGGCAT TCCAGTGGTT CAACGAATTG TCGACGCGCG AGCGCCGGAC GCTGTACGCC 
GGATTCGGCG GCTATGCGGT CGATGCGTTC GACTTCATGA TCTATTCGTT CCTGATCCCG
ACGCTGATCG CCACCTGGGG CATGACGAAG AGCGAGGCCG GGATGATCGC GACCAGTTCG
CTGATCTCGT CGGCGATCGG CGGCTGGGTC GCCGGCATCC TCGCCGACCG CTATGGCCGC
GTGCGCGTGT TGCAGTGGAC GATCGCGACG TTCGCGCTGT TCACGTGCCT GTCCGGCTTC
ACGCATTCGT TCTGGCAGCT CCTTGCGACG CGCACGCTGC AGGGTTTCGG CTTCGGCGGC
GAATGGTCGG TCGTGACGAT CATGATGGCC GAGACGATCC GCTCGCCCGA GCATCGCGCG
AAGGCCGTCG GCACCGTGCA GAGCAGCTGG TCGTTCGGCT GGGGCGCGGC CGCGATCCTC
TACTGGGCGT TCTTCGCGCT GCTGCCGGAG CAGGTCGCGT GGCGCGCGTG CTTCTGGATC
GGCATCGTGC CCGCCCTGTG GATTCTCTAT ATCCGCCGCA ACGTCAGCGA TCCGGACATC
TATACGGCCA CGCGCCGCGC CCGCGACGAA GGCCGCGTGT CGGGCCACTT CCTCGAGATC
TTCTCGCCGC CGCACCTGCG CGCGACGCTG TTCGGCAGCG CGCTGTGCAC CGGCATGCTC
GGCGGCTACT ACGCGATCAC GACGTGGCTG CCCACCTATC TCAAGACTGT GCGCCACCTG
TCGGTGTTCA ACACGAGCGG CTATCTGGTC GTGCTGATCG TCGGCTCGTT CGTCGGCTAC
GTGGTCGGCG CGATCCTGTC CGACCGGCTC GGCCGCCGCG CGTCCTTCAT CCTGTTCGCG
GTCGGCTCGT TCTCGCTTGG CATGGCGTAC ACGATGCTGC CGATCACCGA TACCGCGATG
CTGCTGCTCG GCTTTCCACT CGGCATCGTC GTGCAGGGCA TCTTCGCCGG CGTCGGCGCG
TATCTGTCGG AGCTGTATCC GGGCGCGATC CGCGGCTCGG GCCAGGGCTT CTGCTACAAC
CTCGGCCGCG GGCTCGGTTC GTTCTTTCCG ATCCTCGTCG GCGCGCTGTC GCAATCGATG
TCGCTCGTGA AGGCGATCGG CCTCGTCGCG GGCGGCGGCT ATCTGCTGGT GATCGTCGCG
GCGCTCGTGC TGCCGGAAAC GCGCGGCAAG TCGCTCGTCG ACGATCCGGC CGTCGCGTCG
TGA
 
Protein sequence
MQAFQWFNEL STRERRTLYA GFGGYAVDAF DFMIYSFLIP TLIATWGMTK SEAGMIATSS 
LISSAIGGWV AGILADRYGR VRVLQWTIAT FALFTCLSGF THSFWQLLAT RTLQGFGFGG
EWSVVTIMMA ETIRSPEHRA KAVGTVQSSW SFGWGAAAIL YWAFFALLPE QVAWRACFWI
GIVPALWILY IRRNVSDPDI YTATRRARDE GRVSGHFLEI FSPPHLRATL FGSALCTGML
GGYYAITTWL PTYLKTVRHL SVFNTSGYLV VLIVGSFVGY VVGAILSDRL GRRASFILFA
VGSFSLGMAY TMLPITDTAM LLLGFPLGIV VQGIFAGVGA YLSELYPGAI RGSGQGFCYN
LGRGLGSFFP ILVGALSQSM SLVKAIGLVA GGGYLLVIVA ALVLPETRGK SLVDDPAVAS