Gene Bcen_2554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_2554 
Symbol 
ID4093065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp2804105 
End bp2805211 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content64% 
IMG OID638015835 
ProductDNA polymerase III subunit beta 
Protein accessionYP_622426 
Protein GI107024099 
COG category[L] Replication, recombination and repair 
COG ID[COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) 
TIGRFAM ID[TIGR00663] DNA polymerase III, beta subunit 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.376427 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACTGG TCAAGACCGA ACGAGACACC CTCCTCAGGC CGCTGCAAAC GGTCAGCGGC 
ATCGTCGAAC GCCGCCATAC GTTGCCGATC CTCGCCAACC TGCTGATCAC CAAGAACGGC
CCGGACGTTT CATTCCTGTC GACCGACCTG GAGCTGCAGA TCACCACGCG CGCCGATTTC
GGCGTCGGCG GCGACCAGAT CGCGACCACC GTCGCGGCCC GCAAGCTGCT CGACATCCTG
CGCGCGATGC CTGACGGCCA GGTCACGCTG TCGCTCGCCG ACAAGCGCCT CACCGTTCAA
TCGGGCAAGA GCCGTTTCGC GCTGCAGACG CTGGCGGCCG ACGAGTTCCC GACCGTCGCG
CAGGCGAAGG ATTTCGGCGC CACGCTGACC GTCCCGCAGA AGTCGTTCCG CCAGTTGCTC
GGCATGGTGC ACTTCGCGAT GGCGCAGCAG GACATCCGCT ACTACCTGAA CGGCATGCTG
CTCGTCGTCG ACGGCGACCA GCTGATGGCC GTGGCCACCG ACGGCCACCG CCTCGCGTTC
TCGTCGATGA AGCTCGAAGG CGGCACGTTC GGCCGCCAGG AAGTCATCGT GCCGCGCAAG
ACGATTCTCG AGCTGCAGCG CCTGCTCGAA GACATCGACG ACACCGTCAC CATCGACATC
GCGCAAACCC AGGCCAAGTT CACGTTCGGC CAGGTCGAGC TCGTGTCGAA ACTCGTCGAG
GGCAAGTTCC CCGACTTCCA GCGCGTGATC CCGAAGGCGC ACAAGAACAC GTTCGAGATC
GGCCGTGAAG AACTGCAGCG TTCGCTGCAG CGCGCGGCGA TCCTGACCTC GGACAAGTTC
AAGGGCGTGC GCTGCATCAT CGCGCCGGGC CAGCTGAAGA TCATGTCGAC CAACGCCGAT
CAGGAAGAGG CGCAGGAAGA ACTCGAAATC GCCTACCAGG GCGATACCGT CGACATCGGC
TTCAACGTCA CGTATCTGCT CGACGTGCTC GCGAACCTGA AGGTCGACAC CGTGCAGGTG
AGCCTCGGCG ACGCCAGCTC GAGCGCGCTG ATCACCGTGC CCGAGAACGA CGAGTTCAAG
TATGTCGTGA TGCCGATGCG CATCTGA
 
Protein sequence
MQLVKTERDT LLRPLQTVSG IVERRHTLPI LANLLITKNG PDVSFLSTDL ELQITTRADF 
GVGGDQIATT VAARKLLDIL RAMPDGQVTL SLADKRLTVQ SGKSRFALQT LAADEFPTVA
QAKDFGATLT VPQKSFRQLL GMVHFAMAQQ DIRYYLNGML LVVDGDQLMA VATDGHRLAF
SSMKLEGGTF GRQEVIVPRK TILELQRLLE DIDDTVTIDI AQTQAKFTFG QVELVSKLVE
GKFPDFQRVI PKAHKNTFEI GREELQRSLQ RAAILTSDKF KGVRCIIAPG QLKIMSTNAD
QEEAQEELEI AYQGDTVDIG FNVTYLLDVL ANLKVDTVQV SLGDASSSAL ITVPENDEFK
YVVMPMRI