Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_2383 |
Symbol | |
ID | 4092969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | + |
Start bp | 2625146 |
End bp | 2626300 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638015663 |
Product | spermidine/putrescine ABC transporter ATP-binding subunit |
Protein accession | YP_622256 |
Protein GI | 107023929 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.888136 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAATCGA TACCCTCTTC CGCTGCTGCA CGCCAGACCC AACCGGCCGC CGCGCCCCGT ACGCAAAACG ACGCATTCGT GCGCATCGAA AACGTCGTGA AGAAATTCGG CGACAGCACG GCCGTCGACA ACGTGAACCT GACGATCGCC AAGAACGAGC TGTTCGCGCT GCTCGGCAGC TCGGGCTGCG GCAAGTCCAC GCTGCTGCGC ATGCTCGCCG GGCTGGAAAC GGCCACCTCC GGCAAGATCT TCGTCGACGG CGAGGATCTC GCGTCGCTGC CGCCGTACCG CCGCCCGGTC AACATGATGT TCCAGTCGTA CGCGCTGTTC CCGCACATGA CGGTCGAATC GAACGTCGCG TTCGGCCTGA AGCAGGAAGG CACGCCGAAA AACGAGATCA AGGAGCGCGT GGCCGACGCG CTCGCGCTCG TGCAGATGAG CAAGTATGCG AAGCGCAAGC CGCACCAGCT GTCCGGCGGC CAGCAGCAGC GCGTCGCGCT GGCCCGCTCG CTGGTGAAGC GCCCAAAGCT GCTGCTGCTC GACGAGCCGA TGTCCGCGCT CGACAAGAAG ATTCGCCAGA AGACCCAGCT CGAACTCGTG AACATCATCG AGAAGGTCGA CGTGACCTGC GTGATGGTCA CGCACGACCA GGAAGAGGCG ATGACGATGG CGAGCCGCCT CGCGGTGATG AGCGAGGGCA AGATCGTGCA GATCGGCTCG CCCGGCGAAG TCTACGAATA CCCGAACAGC CGCTTCTCCG CCGAATTCAT CGGCTCGACC AACCTGTTCG AGGGGCGCGT GGTCGAGGAC GAGCCCGATC ACATCTTCGT CGAAAGCGAC GACCTCGAGA CGCGCATGTA CGTGAGCCAC GGCGTGACCG GCCCGCTCGG GATGCCGGTC GGCATCTCGG TGCGCCCGGA GCGCATCCAC GTATCGCGCG AGAAGCCGGG CTCGAAGCAC AACTGGGCGC GCGGCGTCGT CACCGACATC GCGTACATGG GCAGCTATTC GCTGTACCAC GTGCGTCTGC CGAGCGGCAA GACGGTGGTG TCGAACCTGT CAAGCTCGCA CCTGATGAAC GACGGCGCAC CGGCGTGGAA CGACGACGTG TTCGTGTCGT GGTCGCCGGC CAGCGGCGTC GTGCTGACGC AGTGA
|
Protein sequence | MQSIPSSAAA RQTQPAAAPR TQNDAFVRIE NVVKKFGDST AVDNVNLTIA KNELFALLGS SGCGKSTLLR MLAGLETATS GKIFVDGEDL ASLPPYRRPV NMMFQSYALF PHMTVESNVA FGLKQEGTPK NEIKERVADA LALVQMSKYA KRKPHQLSGG QQQRVALARS LVKRPKLLLL DEPMSALDKK IRQKTQLELV NIIEKVDVTC VMVTHDQEEA MTMASRLAVM SEGKIVQIGS PGEVYEYPNS RFSAEFIGST NLFEGRVVED EPDHIFVESD DLETRMYVSH GVTGPLGMPV GISVRPERIH VSREKPGSKH NWARGVVTDI AYMGSYSLYH VRLPSGKTVV SNLSSSHLMN DGAPAWNDDV FVSWSPASGV VLTQ
|
| |