Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_2268 |
Symbol | |
ID | 4093010 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | + |
Start bp | 2503448 |
End bp | 2505241 |
Gene Length | 1794 bp |
Protein Length | 597 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638015549 |
Product | YadA-like |
Protein accession | YP_622142 |
Protein GI | 107023815 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport [W] Extracellular structures |
COG ID | [COG5295] Autotransporter adhesin |
TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGGTA TCTCCGCTGC ACACTCCCGT ACGACGCGTG CCCGCTCGCA TGCTTCGCTC AAACGACAAC GCACGCCGTC CGCCCGCCTG TCGGCGCTCG CCCTCGCCAT CGCCGCACTC GCGCCGTGCT ACGGCCACGC GTCCGGCACC GATCTCGTCG AGACCAACCT GATCGTCAAG GGCGGCGACA GCGGCGACCC GATCGCCTCG GGCGCCGGCT CGATCGCAAT CGGTGCGGGC GCGAAGGCGA CCGGCGAAAC CGGTGGCGAT TATTCCGCGA TCGCGATCGG TGACAGAGCC GTCGCCAATG GTCGCTCGAC CATCGCCGTC GGCGAAGCGG CGAACGTCCA TGGCGATCGC TCGAGCGCCT TCGGCGTGTC GTCAAGCGTC AACGCGAATC GCGCGCTGGC GCTCGGCGCG GACGCGAAGG TCACCGCGCA CGGTGCGGTC GCGCTCGGCC AGGGCAGCGT CGCCGATCGC ACGAACACCG TGTCGATCGG CACGGCGGAC ACCCAGCGCC AGCTCGTCAA CCTCGGCGCA GGCACGCGCG ACACCGACGC AACCAACCTG TCGCAGTTGA AGCCCGTGGT CGCGGCGCTC GGCGGCGATG CGGCCGTCAA CGCGGACGGC ACCGTGCGCG GCCCGAACTA CACGGTGGAC GGACGATCGT TCAACACCGT CGGCGGTGCG CTGACCCAAC TCGACGGACG CGTCACGACG ATCGACGGGC GTGTCACCAC CGTCGAAAAC AACGTCACGT CGATCCGCAA CGACGTCACC GATCTCGGCA CGCGGCTCGA CAACGGCACG ACCGGCCTCG TCCGGCAGGA CCCGGCGAAT CTCGCAATCT CGATCGGCGC CGACAAGGGC GGCACGTCGG TCAGCGTCGC CGGCACTGAC GGCACGCGCA CGCTGACCGG CCTGTCGAAC GGCACCGGCG ACACCGATGC CGTGACGGTC GCGCAGCTCA AGGCGACCGG GCTGATCGAT CCGAACGGCA AGGCGCTCGG CGCGATCGTG TACGACGACC TGACGCTGAA TCGCGCGACG CTCGGCGGCG TCGGCGGCAC CTTGCTCGAC AACGTCAAGG CAGGCGCGAT CGCGGCGAGC AGCATGCAGG CCGTCAACGG CGCGCAGCTC TTCTCGATGC AGCAGCAATT CGAAACGCGC CTGGAATCGC TCGACACGCG CATCAAGAAC ATCGAGCAGG TCGGCCCGAA CACCCGGCCG CCGACCGGCG AGCAGGGCGG CCAGCTGGCG CAGCTGGGCG ACGGCTCCGG CGCGACCGGC TCGGACTCGA TGGCGCCCGG CCCGAACTCG AGCGCATCCG GCAACGGCAG CCTCGCGATC GGCAACAACA CGACGGCGCC GGGCAACAAT TCGGTGGCAC TCGGCAACGG CTCCGTCGCC GATCGCGACA ACACGGTGTC CGTCGGCGCG CCGGGGCAGG AGCGGCAGAT CACCAACGTC AAGGCCGGCA CCGCGCCGAC CGACGCCGTG AACGTGCAGC AACTGAACGA CCACATCGGC AGCGTTCGTT CCGACATGGA TCATTACCGG CGCGACGCGA GCGGCGGTAT TGCGTCGGCG GTGGCGATCG CGAACTTGCC GCAGGCATCG CTGGCAGGCG AAAGCATGGT GGCGATCGCC GGCGGCACCT ACAGCGGGCA GTCGGCCGTC GCGTTCGGCC TGTCGACCGC CACCCGCAAC GGGCGCTGGG TGGTCAAGGC GTCCGGGTCG ACCAATACCC GCGGCACGGT CGCGGTCGGC GCCGGCGCCG GCTATCGCTG GTAA
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Protein sequence | MSGISAAHSR TTRARSHASL KRQRTPSARL SALALAIAAL APCYGHASGT DLVETNLIVK GGDSGDPIAS GAGSIAIGAG AKATGETGGD YSAIAIGDRA VANGRSTIAV GEAANVHGDR SSAFGVSSSV NANRALALGA DAKVTAHGAV ALGQGSVADR TNTVSIGTAD TQRQLVNLGA GTRDTDATNL SQLKPVVAAL GGDAAVNADG TVRGPNYTVD GRSFNTVGGA LTQLDGRVTT IDGRVTTVEN NVTSIRNDVT DLGTRLDNGT TGLVRQDPAN LAISIGADKG GTSVSVAGTD GTRTLTGLSN GTGDTDAVTV AQLKATGLID PNGKALGAIV YDDLTLNRAT LGGVGGTLLD NVKAGAIAAS SMQAVNGAQL FSMQQQFETR LESLDTRIKN IEQVGPNTRP PTGEQGGQLA QLGDGSGATG SDSMAPGPNS SASGNGSLAI GNNTTAPGNN SVALGNGSVA DRDNTVSVGA PGQERQITNV KAGTAPTDAV NVQQLNDHIG SVRSDMDHYR RDASGGIASA VAIANLPQAS LAGESMVAIA GGTYSGQSAV AFGLSTATRN GRWVVKASGS TNTRGTVAVG AGAGYRW
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