Gene Bcen_2268 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_2268 
Symbol 
ID4093010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp2503448 
End bp2505241 
Gene Length1794 bp 
Protein Length597 aa 
Translation table11 
GC content70% 
IMG OID638015549 
ProductYadA-like 
Protein accessionYP_622142 
Protein GI107023815 
COG category[U] Intracellular trafficking, secretion, and vesicular transport
[W] Extracellular structures 
COG ID[COG5295] Autotransporter adhesin 
TIGRFAM ID[TIGR03304] outer membrane insertion C-terminal signal 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGGTA TCTCCGCTGC ACACTCCCGT ACGACGCGTG CCCGCTCGCA TGCTTCGCTC 
AAACGACAAC GCACGCCGTC CGCCCGCCTG TCGGCGCTCG CCCTCGCCAT CGCCGCACTC
GCGCCGTGCT ACGGCCACGC GTCCGGCACC GATCTCGTCG AGACCAACCT GATCGTCAAG
GGCGGCGACA GCGGCGACCC GATCGCCTCG GGCGCCGGCT CGATCGCAAT CGGTGCGGGC
GCGAAGGCGA CCGGCGAAAC CGGTGGCGAT TATTCCGCGA TCGCGATCGG TGACAGAGCC
GTCGCCAATG GTCGCTCGAC CATCGCCGTC GGCGAAGCGG CGAACGTCCA TGGCGATCGC
TCGAGCGCCT TCGGCGTGTC GTCAAGCGTC AACGCGAATC GCGCGCTGGC GCTCGGCGCG
GACGCGAAGG TCACCGCGCA CGGTGCGGTC GCGCTCGGCC AGGGCAGCGT CGCCGATCGC
ACGAACACCG TGTCGATCGG CACGGCGGAC ACCCAGCGCC AGCTCGTCAA CCTCGGCGCA
GGCACGCGCG ACACCGACGC AACCAACCTG TCGCAGTTGA AGCCCGTGGT CGCGGCGCTC
GGCGGCGATG CGGCCGTCAA CGCGGACGGC ACCGTGCGCG GCCCGAACTA CACGGTGGAC
GGACGATCGT TCAACACCGT CGGCGGTGCG CTGACCCAAC TCGACGGACG CGTCACGACG
ATCGACGGGC GTGTCACCAC CGTCGAAAAC AACGTCACGT CGATCCGCAA CGACGTCACC
GATCTCGGCA CGCGGCTCGA CAACGGCACG ACCGGCCTCG TCCGGCAGGA CCCGGCGAAT
CTCGCAATCT CGATCGGCGC CGACAAGGGC GGCACGTCGG TCAGCGTCGC CGGCACTGAC
GGCACGCGCA CGCTGACCGG CCTGTCGAAC GGCACCGGCG ACACCGATGC CGTGACGGTC
GCGCAGCTCA AGGCGACCGG GCTGATCGAT CCGAACGGCA AGGCGCTCGG CGCGATCGTG
TACGACGACC TGACGCTGAA TCGCGCGACG CTCGGCGGCG TCGGCGGCAC CTTGCTCGAC
AACGTCAAGG CAGGCGCGAT CGCGGCGAGC AGCATGCAGG CCGTCAACGG CGCGCAGCTC
TTCTCGATGC AGCAGCAATT CGAAACGCGC CTGGAATCGC TCGACACGCG CATCAAGAAC
ATCGAGCAGG TCGGCCCGAA CACCCGGCCG CCGACCGGCG AGCAGGGCGG CCAGCTGGCG
CAGCTGGGCG ACGGCTCCGG CGCGACCGGC TCGGACTCGA TGGCGCCCGG CCCGAACTCG
AGCGCATCCG GCAACGGCAG CCTCGCGATC GGCAACAACA CGACGGCGCC GGGCAACAAT
TCGGTGGCAC TCGGCAACGG CTCCGTCGCC GATCGCGACA ACACGGTGTC CGTCGGCGCG
CCGGGGCAGG AGCGGCAGAT CACCAACGTC AAGGCCGGCA CCGCGCCGAC CGACGCCGTG
AACGTGCAGC AACTGAACGA CCACATCGGC AGCGTTCGTT CCGACATGGA TCATTACCGG
CGCGACGCGA GCGGCGGTAT TGCGTCGGCG GTGGCGATCG CGAACTTGCC GCAGGCATCG
CTGGCAGGCG AAAGCATGGT GGCGATCGCC GGCGGCACCT ACAGCGGGCA GTCGGCCGTC
GCGTTCGGCC TGTCGACCGC CACCCGCAAC GGGCGCTGGG TGGTCAAGGC GTCCGGGTCG
ACCAATACCC GCGGCACGGT CGCGGTCGGC GCCGGCGCCG GCTATCGCTG GTAA
 
Protein sequence
MSGISAAHSR TTRARSHASL KRQRTPSARL SALALAIAAL APCYGHASGT DLVETNLIVK 
GGDSGDPIAS GAGSIAIGAG AKATGETGGD YSAIAIGDRA VANGRSTIAV GEAANVHGDR
SSAFGVSSSV NANRALALGA DAKVTAHGAV ALGQGSVADR TNTVSIGTAD TQRQLVNLGA
GTRDTDATNL SQLKPVVAAL GGDAAVNADG TVRGPNYTVD GRSFNTVGGA LTQLDGRVTT
IDGRVTTVEN NVTSIRNDVT DLGTRLDNGT TGLVRQDPAN LAISIGADKG GTSVSVAGTD
GTRTLTGLSN GTGDTDAVTV AQLKATGLID PNGKALGAIV YDDLTLNRAT LGGVGGTLLD
NVKAGAIAAS SMQAVNGAQL FSMQQQFETR LESLDTRIKN IEQVGPNTRP PTGEQGGQLA
QLGDGSGATG SDSMAPGPNS SASGNGSLAI GNNTTAPGNN SVALGNGSVA DRDNTVSVGA
PGQERQITNV KAGTAPTDAV NVQQLNDHIG SVRSDMDHYR RDASGGIASA VAIANLPQAS
LAGESMVAIA GGTYSGQSAV AFGLSTATRN GRWVVKASGS TNTRGTVAVG AGAGYRW