| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_2187 |
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| Symbol | ipk |
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| ID | 4092119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia AU 1054 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008060 |
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| Strand | + |
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| Start bp | 2413493 |
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| End bp | 2414374 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638015467 |
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| Product | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase |
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| Protein accession | YP_622061 |
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| Protein GI | 107023734 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
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| TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00895693 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGATT CGACCCGCTC GCTGCGCAAC TGCCTGGCGC CCGCGAAACT CAACCTGTTC
CTGCACATCA CCGGCCGTCG TCCGAACGGC TATCACGATC TGCAGAGCGT ATTCCAGCTG
CTGAACTGGG GCGACACGCT GCACTTCACG CGGCGCGACG ACGGCCGCGT CGCACGCGTC
ACCGACGTGC CCGGCGTGCC CGAGGAAAGC GATCTCGTCG TGCGCGCGGC CAACCTGCTG
AAAGCGCATA CGGATACCGC GCACGGCGTC GACATCGAGA TCGACAAGAT CCTGCCGATG
GGCGCCGGCC TCGGCGGCGG CAGCTCCGAC GCGGCGACGA CGCTGCTCGC GCTGAACCGC
CTGTGGCAAC TCGATTTGCC GCGCGCCGAG CTTCAGTCGC TCGCGGTCAA ACTCGGCGCC
GACGTCCCGT TTTTTATTTT TGGAAAAAAT GCGTTCGCAG AGGGTATCGG AGAAGAATTA
GCTGAGGTAG AATTGCCGAC TCGCTGGTTC TTGGTTGTGA CGCCACGCGT TCATGTCCCG
ACCGCTGAAA TATTTTCAGA TGAGTTGTTG ACAAGAGATA CGAAGCCCGT CACAATTGCT
GACTTTCTTG CACAGCAAAC CAGCGATGCG GAATGGCCAG ATAGCTTCGG CCGGAACGAT
ATGCAGGAAG TTGTAACAAG GAAGTACGCG GAAGTTGCGC AGGTGGTCAA ATGGTTGTAT
GATGTGACCC CCGCGAGGAT GACCGGCTCC GGAGCAAGCG TGTTTGCAGC GTTTCACAGC
AAGCACGAGG CAGAAGCGGC GAAAGCCAAA CTGCCCGCCA GTTGGAATGG CGCAGTTGCC
GAGAGTCTGA ACGAGCATCC GCTCTTCGCT TTCGCGTCAT GA
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| Protein sequence | MTDSTRSLRN CLAPAKLNLF LHITGRRPNG YHDLQSVFQL LNWGDTLHFT RRDDGRVARV
TDVPGVPEES DLVVRAANLL KAHTDTAHGV DIEIDKILPM GAGLGGGSSD AATTLLALNR
LWQLDLPRAE LQSLAVKLGA DVPFFIFGKN AFAEGIGEEL AEVELPTRWF LVVTPRVHVP
TAEIFSDELL TRDTKPVTIA DFLAQQTSDA EWPDSFGRND MQEVVTRKYA EVAQVVKWLY
DVTPARMTGS GASVFAAFHS KHEAEAAKAK LPASWNGAVA ESLNEHPLFA FAS
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