Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_2187 |
Symbol | ipk |
ID | 4092119 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | + |
Start bp | 2413493 |
End bp | 2414374 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638015467 |
Product | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase |
Protein accession | YP_622061 |
Protein GI | 107023734 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00895693 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGATT CGACCCGCTC GCTGCGCAAC TGCCTGGCGC CCGCGAAACT CAACCTGTTC CTGCACATCA CCGGCCGTCG TCCGAACGGC TATCACGATC TGCAGAGCGT ATTCCAGCTG CTGAACTGGG GCGACACGCT GCACTTCACG CGGCGCGACG ACGGCCGCGT CGCACGCGTC ACCGACGTGC CCGGCGTGCC CGAGGAAAGC GATCTCGTCG TGCGCGCGGC CAACCTGCTG AAAGCGCATA CGGATACCGC GCACGGCGTC GACATCGAGA TCGACAAGAT CCTGCCGATG GGCGCCGGCC TCGGCGGCGG CAGCTCCGAC GCGGCGACGA CGCTGCTCGC GCTGAACCGC CTGTGGCAAC TCGATTTGCC GCGCGCCGAG CTTCAGTCGC TCGCGGTCAA ACTCGGCGCC GACGTCCCGT TTTTTATTTT TGGAAAAAAT GCGTTCGCAG AGGGTATCGG AGAAGAATTA GCTGAGGTAG AATTGCCGAC TCGCTGGTTC TTGGTTGTGA CGCCACGCGT TCATGTCCCG ACCGCTGAAA TATTTTCAGA TGAGTTGTTG ACAAGAGATA CGAAGCCCGT CACAATTGCT GACTTTCTTG CACAGCAAAC CAGCGATGCG GAATGGCCAG ATAGCTTCGG CCGGAACGAT ATGCAGGAAG TTGTAACAAG GAAGTACGCG GAAGTTGCGC AGGTGGTCAA ATGGTTGTAT GATGTGACCC CCGCGAGGAT GACCGGCTCC GGAGCAAGCG TGTTTGCAGC GTTTCACAGC AAGCACGAGG CAGAAGCGGC GAAAGCCAAA CTGCCCGCCA GTTGGAATGG CGCAGTTGCC GAGAGTCTGA ACGAGCATCC GCTCTTCGCT TTCGCGTCAT GA
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Protein sequence | MTDSTRSLRN CLAPAKLNLF LHITGRRPNG YHDLQSVFQL LNWGDTLHFT RRDDGRVARV TDVPGVPEES DLVVRAANLL KAHTDTAHGV DIEIDKILPM GAGLGGGSSD AATTLLALNR LWQLDLPRAE LQSLAVKLGA DVPFFIFGKN AFAEGIGEEL AEVELPTRWF LVVTPRVHVP TAEIFSDELL TRDTKPVTIA DFLAQQTSDA EWPDSFGRND MQEVVTRKYA EVAQVVKWLY DVTPARMTGS GASVFAAFHS KHEAEAAKAK LPASWNGAVA ESLNEHPLFA FAS
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