Gene Bcen_2180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_2180 
Symbol 
ID4092112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp2406089 
End bp2407057 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content66% 
IMG OID638015460 
ProductHPr kinase/phosphorylase 
Protein accessionYP_622054 
Protein GI107023727 
COG category[T] Signal transduction mechanisms 
COG ID[COG1493] Serine kinase of the HPr protein, regulates carbohydrate metabolism 
TIGRFAM ID[TIGR00679] Hpr(Ser) kinase/phosphatase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0153902 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATACGT CCAGCATCAA CGCCCAGAGC ATCTTCGACG ACAACGCAGC CACGCTGAAA 
CTGAGCTGGC TGACGGGGCA TGAAGGCTGG GAACGCGGCT TTTCGGCCGA CACGGTCGGC
AACGCAACGT CGAGCGCCGA CCTCGTCGGC CACCTGAACC TGATCCACCC GAACCGGATC
CAGGTGCTCG GCGAAGCCGA AATCGACTAC TACCAGCGCC AGACCGACGA AGACCGTTCG
CGCCACATGG CCGAGCTGAT CGCGCTCGAA CCACCGTTCC TCGTCGTCGC CGGCGGTGCC
GCGGCGCCGC CCGAACTGGT GCTGCGCTGC ACGCGCTCGT CCACCCCGCT GTTCACGACG
CCGATGTCGG CCGCCGCCGT GATCGACAGC CTGCGGCTCT ACATGTCGCG CATCCTCGCG
CCGCGCGCGA CGCTGCACGG CGTGTTCCTC GACATTCTCG GGATGGGCGT GCTGCTGACC
GGCGATTCGG GCCTCGGCAA GAGCGAACTC GGCCTCGAGC TGATCAGCCG CGGGCACGGC
CTCGTCGCCG ACGACGCGGT CGATTTCGTC CGTCTTGGCC CCGATTTCGT CGAAGGGCGC
TGCCCGCCGC TGCTGCAGAA CCTGCTCGAA GTGCGCGGCC TCGGCCTGCT CGACATCAAG
ACGATCTTCG GCGAAACCGC CGTGCGGCGG AAAATGAAGC TGAAGCTGAT CGTTCAGCTC
GTGCGGCGCC CCGACGGCGA ATTCCAGCGC CTGCCGCTCG AAAGCCAGAC CGTCGACGTG
CTCGGGTTGC CGATCAGCAA GGTCACGATC CAGGTCGCGG CCGGCCGCAA CCTCGCGGTG
CTCGTCGAGG CGGCCGTCCG GAACACGATC CTGCAGTTGC GCGGAATCGA CACGTTGCGC
GATTTCATGG ATCGGCAACG ACTCGCGATG CAAGATCCCG ACAGTCAGTT CCCCGGCAAA
CTGGTGTAA
 
Protein sequence
MDTSSINAQS IFDDNAATLK LSWLTGHEGW ERGFSADTVG NATSSADLVG HLNLIHPNRI 
QVLGEAEIDY YQRQTDEDRS RHMAELIALE PPFLVVAGGA AAPPELVLRC TRSSTPLFTT
PMSAAAVIDS LRLYMSRILA PRATLHGVFL DILGMGVLLT GDSGLGKSEL GLELISRGHG
LVADDAVDFV RLGPDFVEGR CPPLLQNLLE VRGLGLLDIK TIFGETAVRR KMKLKLIVQL
VRRPDGEFQR LPLESQTVDV LGLPISKVTI QVAAGRNLAV LVEAAVRNTI LQLRGIDTLR
DFMDRQRLAM QDPDSQFPGK LV