Gene Bcen_2144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_2144 
Symbol 
ID4091193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp2369617 
End bp2370333 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content70% 
IMG OID638015424 
Productshort chain dehydrogenase 
Protein accessionYP_622018 
Protein GI107023691 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGGCGC TCGTGACGGG CGGCAGCGGC GCACTCGGGC AGGCGATTTG CACGGCGCTC 
GCGCAGGCCG GCCATGAAGT GTGGGTGCAT GCGAACCGCC ATCTCGAGCA GGCGCAGGCC
GTCGCGCAAC GGATCGTCGC GGCCGGCGGC GCCGCGCACG CGATCGCGTT CGACGTGACC
GACGCCGATG CGACGCTCGC CGCGCTGAAG CCGTTCATCG ACGAGACGCC GGTGCAGATC
CTCGTCAACA ACGCGGGCAT TCACGACGAC GCGCCGATGG CCGGCATGTC GCGCCAGCAA
TGGCACAGCG TGATCGACGT GACGCTCAAC GGCTTTTTCA ACGTCACGCA GCCGCTGCTG
CTGCCGATGA TCCGCACGCG GCGCGGGCGG ATCGTCAACA TCGCGTCGGT GGCCGGCGTG
ACCGGCAATC GCGGGCAGGC CAATTACGCG GCCGCGAAGG CGGGGCTGAT CGGCGCGACG
AAGTCGCTGT CGCTGGAGCT CGCGTCGCGC GGCATCACCG TGAACGCGGT GGCGCCCGGC
ATCATCGCGT CGCCGATGGC CGACCAGGCG TTTCCCGCGG AACGCATCAA GCAGCTCGTG
CCCGCGCAGC GCGCGGGCCG GCCCGACGAA GTCGCGGCGA TGGTCGCGTA TCTGGTATCC
GACGCCGCGG CCTATGTGAC GGGGCAGGTG TTGTCCGTCA ACGGCGGGCT CGCATGA
 
Protein sequence
MRALVTGGSG ALGQAICTAL AQAGHEVWVH ANRHLEQAQA VAQRIVAAGG AAHAIAFDVT 
DADATLAALK PFIDETPVQI LVNNAGIHDD APMAGMSRQQ WHSVIDVTLN GFFNVTQPLL
LPMIRTRRGR IVNIASVAGV TGNRGQANYA AAKAGLIGAT KSLSLELASR GITVNAVAPG
IIASPMADQA FPAERIKQLV PAQRAGRPDE VAAMVAYLVS DAAAYVTGQV LSVNGGLA