Gene Bcen_2079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_2079 
Symbol 
ID4091244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp2295415 
End bp2296665 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content72% 
IMG OID638015359 
Productmajor facilitator transporter 
Protein accessionYP_621953 
Protein GI107023626 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGCAC ATCCCGCTTT CTTGTGCGGT GCGGCACCGA ACCGGCGCCG CGGCCGCCGC 
CTTCCGGAGA ACGTCATGCC CATTCCGCTC CTGGCGCTCG CGATCAGCGC CTTCGCCATC
GGCACCACCG AATTCATCAT CATGGGTCTG CTGCCCGAAG TCGCGCACGA CCTCGTCGTG
TCGCTGCCGT CGGCCGGCCT GCTCGTCACC GGCTACGCGC TCGGCGTCGC GGTCGGCGCG
CCGCTGCTCG CGGTGCTGAC GAGCCGCATG CCGCACAAGG CCGCGCTGCA GTTACTGATG
GGGATCTTCA TCGTCGGCAA CGTGCTGTGC GCGACCGCGT CCGGCTACGC GATGCTGATG
GTCGCGCGCG TCGTCACGTC GTTCGCGCAC GGCTCGTTCT TCGGCATCGG CGCGGTGGTC
GCCGCGTCGC TCGTGCCGGC CGACAAGCGC GCGAGCGCGA TCGCGCTGAT GTTCACCGGG
CTCACGTTGT CGAACGTGCT CGGCGTGCCG TTCGGCACGT TCGTCGGCCA GTTGCTCGGC
TGGCGCGCGT CGTTCTGGAT CGTCGCCGCG CTCGGCGTGC TGGCGCTCGG CGGCGTGGCC
GCGCTGGTGC CGAACCGCCA CGACAGCGGG CCGGTCGGCC TCGGCCACGA AGTGCGCGTG
CTGAAGGAGC CGCAGGTGTG GCTCGCGCTG CTGATGACGG TGCTCGGCTT CGGCGGCGTG
TTCGTCGTAT TCACCTACAT CGCGCCGATC CTCGAGGCCG TGTCGGGCTA CTCGCCGCGC
GCGGTCGCGC TGATCCTCGT GTTGTTCGGC GCGGGGCTGA CGATCGGCAA CACGATCGGC
GGCAAGCTCG CCGACCGCGC GCTGATGCCG TCGCTGATCG CGATCCTCGT TGCGCTGATG
GCCGTGATGG CCGTGTTCGC GAAGACGAGC CACCTGCCGG TCGCGGCCGC CGTGACCGTA
TTCGTCTGGG GGATCGCCGC GTTCGCGACG GTGCCGCCGC TGCAGGCGCG CGTGGTCGAG
AAGGCCGCGA GCGCGCCGCA TCTGGCGTCG ACGCTGAACA TCGGCGCGTT CAACGTCGGC
AATGCGGGCG GCGCGTGGCT TGGCGGCCTC GCGCTGGAAC ATGGCTTCGC GCTCGATGCG
CTGCCGTGGG TCGCGGTCGC GGTGACGTTC GCGGCGCTGG TCGTCACGTG GCTCGCGATG
CGGCTCGACG CGCGCGGCCC GGCGCGCGGG GCCGCGCCGG CGGCGCAGTA A
 
Protein sequence
MRAHPAFLCG AAPNRRRGRR LPENVMPIPL LALAISAFAI GTTEFIIMGL LPEVAHDLVV 
SLPSAGLLVT GYALGVAVGA PLLAVLTSRM PHKAALQLLM GIFIVGNVLC ATASGYAMLM
VARVVTSFAH GSFFGIGAVV AASLVPADKR ASAIALMFTG LTLSNVLGVP FGTFVGQLLG
WRASFWIVAA LGVLALGGVA ALVPNRHDSG PVGLGHEVRV LKEPQVWLAL LMTVLGFGGV
FVVFTYIAPI LEAVSGYSPR AVALILVLFG AGLTIGNTIG GKLADRALMP SLIAILVALM
AVMAVFAKTS HLPVAAAVTV FVWGIAAFAT VPPLQARVVE KAASAPHLAS TLNIGAFNVG
NAGGAWLGGL ALEHGFALDA LPWVAVAVTF AALVVTWLAM RLDARGPARG AAPAAQ