| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_2028 |
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| Symbol | |
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| ID | 4091267 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia AU 1054 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008060 |
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| Strand | + |
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| Start bp | 2237870 |
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| End bp | 2240557 |
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| Gene Length | 2688 bp |
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| Protein Length | 895 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638015307 |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_621902 |
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| Protein GI | 107023575 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria
[COG4253] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.14177 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTCGC AAGCGTTAAG AAGCGCGTTG CTGGCCGGAC CGGTTCAGCA TGAGCGCCTG
ATCAAACTGG ATACCCCGCT CGGCCCCGAC GTCCTGTTGC CGCAGCGCGT CACGGGACGA
TCGCGCCTCG GACGCCATTT CGAGTTCACC GTCGATACCG TGTCGGTATC CGACGACCTC
GAACTCAAGA AACTGATCGC GCAGCCGGTG ACGCTGTGGA TCCAGCAGGC CGGCCAATCG
TACGCGCCGC ACCACGGCTA CGTGCATGCG GCCCGCCGGC TCGGGTCGGA CAGCGGCGTC
ACGCACCATC AGATCGTCTT TGCGTCGTTC CTGCACTTCC TGAAGTTCCG CCGCGATCAG
CGCATCTGGC AGGACCGGTC GGCGGACGAC ATCATCGCCG ACGTGCTGAA CCAGCATCCG
CAGGCCAAGG GCCGCTTCAC GTTCAAGCTC TACCAGCCGC TGCCGCCGCG CTCGTTCTGC
ATGCAATACG AGGACGACTG GAATTTCGTC CATCGCCTAA TGGAATCGGA AGGCCTGTAC
GGTTTCTGGG AACAGGACAG CGACGGCAAG TCGCACCGGC TCGTCATCGT CGATCGCATC
GACGCGTTGC CCGCGCTGTC GCCGCGAACC GTGCGCTTTC ATCACGCGGG CACGGGCGAC
GAAGCCGACA CGCTCGTCCA GTTCAGCGGT ACACGCACGC TGCGCAGCGT CGCACGCACC
ACGCGCACGT TCGACTACAA GCAGCCGCCC ACCGCGTCGA ATCCGAAGGC CACCCATACG
CCGACGATCG CGAACCAGGG CGATCTGCCG CAGCAGCTCG AAGTCTACGA ATACACGGGT
GCCTACACGT ATCCCGAGCA GTCACGCGGC GACCATCTGT CGAAGATCTG GATGGAAGAG
CAGGAATCGC ACGCGAAGCG CTTTCACGGT GTCGGCGGTG TGCGGCGCAT GGACGCCGGA
CGCGTGTTCG AGTTCGCGGA ACACCCCGAA CACGACAAGG ACGATGCCGG CCAGCGCGAA
TTCGCCGTGA TCGAGACGGC GTGGGTCATC GTCAACAACC TGCCCGTGGC CGACGAGCCG
GCCGTTTTCC CGCACAGCCT GCAGGCCGAG ATCGGCAGCA TCATGCAGGC CACCGATACG
GACCGGTCGC GCGTGCGTCA TCCCGACGGC AGCGAGGGCT TCTTTCAGAT CCGCATCGAG
GCGCAGCGCA CGACGGTGCC GTTCCGCAGC CCGTTCGAGC ACGCGAAGCC GCCGATGCAC
CTGCAATCGG CGACCGTCGT CGCGCCGCAA GGCGAAGAAG TCCATACGGA CGAGCTCAAC
CGCGTCAAGG TCCGCTTTCA CTGGGACCGC TTGAACGACG GCGACGAAAA GGCGTCGTGC
TGGCTGCGTG CCACGGCGTC CGATTCGGGC AATGGCTACG GTGCCGTCCA CCCGCACCGC
AGCGGCGAGG AAGTGCTGGT CGACTTCCTC GGCGGCGACT GCGATCGTCC GATCATCGTC
GGCAAGGTCT ACAACGGCGC GACGAGCCCG CAATGGCACA GCAACGGCAT CCTGTCCGGG
TACCGCTCCA AGGAATACGC GGGCGCCGGC TACAACCAGC TGGTGCTCGA CGACGCGACC
GCGCAGAACC GCGTGCACCT GTACAGCAGC CAGACCAACG CACATCTGCA TCTCGGCTAC
CTGATCGACC ACACGGGCAA CAACCGCGGC AGCTATCTCG GCAGTGGCTT CGACCTGCGC
TCGGACGCCT ACGGCGCCGT GCGCGCGAAC CGCGGGCTGT ACGTCACGAC GCATCCCAAG
CAGGCGGCCA GCCAGCCGCT CGACGTCGAC GAGACCCGGG AGCAGCTCGT GCGCGCGCAA
GGGCTGATCG ACGCCATGTC GCAGGTCAGC GCGCAGCATC AGGGCGAGTC GCTCGACCCC
GGCCACACGG CGCTGAAGCA GTTCAGCGAC GCGACGCAGA ACAGCGTGAG CGGCAACGCG
TCGGGCGGCC GGACCGCCGG CGGCGGAACC GGCAACGCCA ACGCGTTCAA GGAGCCCGTG
ATGCTGTTCG GCAGCCCGGC CGGCATCGGG ATGTCCACGC AGCAGTCCGC GCAATTTTCC
GCGGACCAGC ACATCAACCT CGTCAGCGGG CAAAGCACGC ACGTCGCCGC CGGGAAATCG
CTGATCGCCA GTGTCCTCGA CCGGATCAGC CTGTTCGCGC AGAACGCGGG GATGAAGCTG
TTCGCCGGCA AGGGCAAGGT CGAAGTGCAG GCGCAGGCGG ACAACATCGA GCTGACCGCG
CAGAAGGCGC TGAAGCTGAT CGCCGTCACG CAATCGATCG AAGGCGCCGC GGCGAAGGAG
ATCCTGCTGA CGTCCGGCGG CGCCTATATC CGCATCGCGG ACGGCAACAT CGAGGTGCAC
GCGCCCGGCA AGATCGACAT CAAGGGCGCG CAGCATGCGT TCAGCGGCCC CACCCACCTG
TCGCAAACGA TGCCGACGCT GCCGAACTCC AACGGCAACT ACGACCAGGC ATTCATCGCG
CACTGGGCCG GCACCGACAT TCCGGTCGCG AACACGCGGT ACCAGATGTT CTCGAACGGC
AAGCTGCTCT CGGAAGGCGT CACCAACGCG GCAGGCGAAA CCGGGCTCAC GCAGAGCCAC
GTGCCGCACG ACGTCGTGGT CAAGTTTCTA GGGAAATCGA ATGGCTGA
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| Protein sequence | MNSQALRSAL LAGPVQHERL IKLDTPLGPD VLLPQRVTGR SRLGRHFEFT VDTVSVSDDL
ELKKLIAQPV TLWIQQAGQS YAPHHGYVHA ARRLGSDSGV THHQIVFASF LHFLKFRRDQ
RIWQDRSADD IIADVLNQHP QAKGRFTFKL YQPLPPRSFC MQYEDDWNFV HRLMESEGLY
GFWEQDSDGK SHRLVIVDRI DALPALSPRT VRFHHAGTGD EADTLVQFSG TRTLRSVART
TRTFDYKQPP TASNPKATHT PTIANQGDLP QQLEVYEYTG AYTYPEQSRG DHLSKIWMEE
QESHAKRFHG VGGVRRMDAG RVFEFAEHPE HDKDDAGQRE FAVIETAWVI VNNLPVADEP
AVFPHSLQAE IGSIMQATDT DRSRVRHPDG SEGFFQIRIE AQRTTVPFRS PFEHAKPPMH
LQSATVVAPQ GEEVHTDELN RVKVRFHWDR LNDGDEKASC WLRATASDSG NGYGAVHPHR
SGEEVLVDFL GGDCDRPIIV GKVYNGATSP QWHSNGILSG YRSKEYAGAG YNQLVLDDAT
AQNRVHLYSS QTNAHLHLGY LIDHTGNNRG SYLGSGFDLR SDAYGAVRAN RGLYVTTHPK
QAASQPLDVD ETREQLVRAQ GLIDAMSQVS AQHQGESLDP GHTALKQFSD ATQNSVSGNA
SGGRTAGGGT GNANAFKEPV MLFGSPAGIG MSTQQSAQFS ADQHINLVSG QSTHVAAGKS
LIASVLDRIS LFAQNAGMKL FAGKGKVEVQ AQADNIELTA QKALKLIAVT QSIEGAAAKE
ILLTSGGAYI RIADGNIEVH APGKIDIKGA QHAFSGPTHL SQTMPTLPNS NGNYDQAFIA
HWAGTDIPVA NTRYQMFSNG KLLSEGVTNA AGETGLTQSH VPHDVVVKFL GKSNG
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