Gene Bcen_2011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_2011 
Symbol 
ID4091173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp2220856 
End bp2221884 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content72% 
IMG OID638015290 
ProductSua5/YciO/YrdC/YwlC 
Protein accessionYP_621885 
Protein GI107023558 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0009] Putative translation factor (SUA5) 
TIGRFAM ID[TIGR00057] Sua5/YciO/YrdC/YwlC family protein 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCATCG ATCTCCCGAC GCACGTGACG CCCGCGCAAA TCGACGCGGC CGCCGCGCTG 
CTCGATGCGG GCCAGCTCGT CGCGTTTCCG ACCGAAACCG TCTACGGGCT CGGCGGCGAT
GCAGCGAACC CCGAGGCCGT CGCGCGCATT TACGCGGCGA AGGGGCGGCC CGCGAATCAT
CCGGTGATCG TGCATCTGCC GCCCGGCGGC GATCCGGGCT ACTGGGCCGA CGATCTGCCG
GCCGACGCGC ACGCGCTGAT CGAGGCATTC TGGCCGGGGC CGCTCACGCT GATCCTGAAG
CGCCACGCGC GCATTCCGGA TGCCGTGAGC GGCGGGCAGG ATTCGGTCGG GCTGCGCTGT
CCGTCGCATC CGGTCGCGCA GGCGCTGCTG GCCGCGTTCA GCGCGCGGCG CGGCGGCCAT
GGCGGCGTGG CCGCGCCGTC CGCGAACCGG TTCGGCCACG TGAGCCCGAC GACCGCGCAA
CACGTGCGCG ACGAATTCGG CGATACCGTG CACGTGCTCG ACGGTGGCGC ATCCGAAGTC
GGCATCGAAT CGACGATTCT CGACCTGTCG CGCGGCTTCC CGGCGCTGCT GCGCCCGGGC
CACGTGACGC CGCAACAGAT CGCCGATGTG CTCGGCCGCG CGCCGAAGCT GCCGGACGGC
AGCGATGCGA CCGCGCCGCG CGCATCGGGC ACGCTGAAAG CGCATTACGC GCCGCGTACG
CCGCTCGCGC TGCTGCCGTT CGACGCGCTC GAGCCGTTGC TCGCGGCCGC GCAAACCGAC
GGCGAACGCG TCGCGCTCGT CGCCCGCGCG TCGCGGGCCG GGCACTGGGC GCAGGCCGAC
GGCGTGCATT TCATCGCGGC GCCGGAAGAT CCGCAGGCCT ATGCACGCGA CCTGTACGGG
ATGCTGCGGG CGCTCGACCG CGCGCAGGTC GCGCGCATCC TCATCGAGAA GCTGCCCGAG
ACCGTCGAAT GGATCGCGGT CAACGATCGC CTCGGCCGCG CGGCGGCCGC ATTCGAAGCG
CGCGACTGA
 
Protein sequence
MSIDLPTHVT PAQIDAAAAL LDAGQLVAFP TETVYGLGGD AANPEAVARI YAAKGRPANH 
PVIVHLPPGG DPGYWADDLP ADAHALIEAF WPGPLTLILK RHARIPDAVS GGQDSVGLRC
PSHPVAQALL AAFSARRGGH GGVAAPSANR FGHVSPTTAQ HVRDEFGDTV HVLDGGASEV
GIESTILDLS RGFPALLRPG HVTPQQIADV LGRAPKLPDG SDATAPRASG TLKAHYAPRT
PLALLPFDAL EPLLAAAQTD GERVALVARA SRAGHWAQAD GVHFIAAPED PQAYARDLYG
MLRALDRAQV ARILIEKLPE TVEWIAVNDR LGRAAAAFEA RD