Gene Bcen_2010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_2010 
Symbol 
ID4091172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp2219618 
End bp2220757 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content69% 
IMG OID638015289 
Productphospholipase/lecithinase/hemolysin-like 
Protein accessionYP_621884 
Protein GI107023557 
COG category[I] Lipid transport and metabolism
[R] General function prediction only 
COG ID[COG3240] Phospholipase/lecithinase/hemolysin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.66526 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGACAC AACAACACGC ACCTTCCCGC AGCCGGCTGC GCATGCTGCG CACCGCGCAG 
GTCGCGATCG CCGGCGCCGC GCTCGCGCTG CTCGCCGCAT GCGGCGGCGG TGACGACAAC
AACGGCAGCA GCGCGTCGAA CACGCCGCCG TCGGGCGTGA AGATGCAGGT CGTGTCGTTC
GGCGACAGCC TGTCCGACGT CGGCACCTAC TCGCAGATCA AGCTCGGCTT CGGCGGCGGC
CGCTTCACGA CCAACCCGGG CCAGGTCTGG ACGCAGGACG TCGCGCAGTA CTACGGCGAC
ACGCTGCAGC CCGCGAACCA GGGCGGCTTC GGCATTCCGC TGCAGGCCAC CGGCGGCCTC
GGCTACGCGC AGGGCGGCTC GCGCGTGACG CTGCAGCCGG GCATCGGCCA TGCGGACGCC
AGCGTGCCGA ACCCCGACTA CGCACAGGCG ACCACCACGC CGATCGCGGA CCAGGTCAAG
CAGTACCTGA CGCAGCACGG CAGCTTCAAC GCCGGCCAGA TCGTGCTGAT CAACGGCGGC
GCGAACGACA TCTTCTACCA GGCCCAGGTC GCACAGGCGC AAGGCAACAC GCCGGCCGCG
CAGCTCGCGG CCGCGCAGGC GATCGGCCTG GCCGCGCAGC AGCTCGGCGG GATCGTCCAG
CAGATCGTCG CGGCAGGCGC GACGCACGTG TTCGTCTCGA ACGTGCCGGA CATCGGCGGC
ACGCCGCTCG CGCTGCAGGG CGGCACGCAG GCCGCGTTCA CGCAACTGTC GGGGCTGTTC
AACAAGACGC TGGTCGGCAC GCTCGCCGCG CTGAAGGTCG ACCCGACGAA GTATGTGGTG
GTCGATGCGT TCACGTGGCA GGACGGCATC GCGGCCAACT ACCAGGCGAA CGGCTTCAGC
GTGTCGAATA CCGACACCGC GTGCAACCTG AAGGCGATGG TCCAGGCCGC CACGCAGTAC
GGCGTCGCGA ACGCGACCGC GTTCGGCTCG TCGCTGTTCT GCTCGCCGCA GACCTACACG
GTCGCGAACG CGGACCAGAC CTACATGTTC GCCGATACGG TCCACCCGAC GACGCACCTG
CATGCGCTGT TCGCGCAGTA CGTCCAGCAG CAGATCGCGA AATCGGGCGT CGGCAAGTAA
 
Protein sequence
MQTQQHAPSR SRLRMLRTAQ VAIAGAALAL LAACGGGDDN NGSSASNTPP SGVKMQVVSF 
GDSLSDVGTY SQIKLGFGGG RFTTNPGQVW TQDVAQYYGD TLQPANQGGF GIPLQATGGL
GYAQGGSRVT LQPGIGHADA SVPNPDYAQA TTTPIADQVK QYLTQHGSFN AGQIVLINGG
ANDIFYQAQV AQAQGNTPAA QLAAAQAIGL AAQQLGGIVQ QIVAAGATHV FVSNVPDIGG
TPLALQGGTQ AAFTQLSGLF NKTLVGTLAA LKVDPTKYVV VDAFTWQDGI AANYQANGFS
VSNTDTACNL KAMVQAATQY GVANATAFGS SLFCSPQTYT VANADQTYMF ADTVHPTTHL
HALFAQYVQQ QIAKSGVGK