Gene Bcen_2001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_2001 
Symbol 
ID4091163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp2209284 
End bp2209949 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content69% 
IMG OID638015280 
Productisochorismatase hydrolase 
Protein accessionYP_621875 
Protein GI107023548 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGACCG CCGTTCCGCA TTCCACTTCC CGTCCTGTTG CCCGCCGTGC ACTGATCGTG 
ATCGACGTGC AGAACGAATA CGTGACGGGC AACCTGCCGA TCGAATATCC GCCGCTCGAC
GTGTCGCTCG CGAACATCGG CCGCGCGATC GACGCCGCGC ACGCGACCGG CGTGCCGGTG
ATCGTGGTTC AGCACGTCGC GCCGGCCGGC GCGCCGATCT TCGCGCCCGG TAGCGATGGC
GTCGCGCTGC ACGCGGTGGT GGCCAGCCGG CCGTACGCGC ACCTGATCGA GAAGGCGCAG
GCGAGCTCGT TCGCCGGCAC CGATCTCGCC GCGTGGCTCG ACGCGCACGG AATCGACACG
CTCGCGGTGG CCGGCTACAT GACGCACAAC TGCAATGCGT CGACGGTCTA TCACGCGGCG
CATGCGGGGC TGAAGGTCGA ATACCTGAAC GACGCGACGG GCGCGCTGCC TTACGAGAAC
GAAGCGGGAG CGGTAAGCGC CGAAGAGATT CACCGCGCGT ATGGCGTGGT GTTCCAGTCG
AATTTCGCGG CGGTGATGTC GACCGACACG TGGATCGCGG GGCTGGCCGG CGCGCCGATG
CCGGCGCGCG ATTCGGTGGC CGCGTCGAAC CGGCGGGCCC GCGCGCAGCG CGCGAAGGCG
GCCTGA
 
Protein sequence
MSTAVPHSTS RPVARRALIV IDVQNEYVTG NLPIEYPPLD VSLANIGRAI DAAHATGVPV 
IVVQHVAPAG APIFAPGSDG VALHAVVASR PYAHLIEKAQ ASSFAGTDLA AWLDAHGIDT
LAVAGYMTHN CNASTVYHAA HAGLKVEYLN DATGALPYEN EAGAVSAEEI HRAYGVVFQS
NFAAVMSTDT WIAGLAGAPM PARDSVAASN RRARAQRAKA A