Gene Bcen_2000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_2000 
Symbol 
ID4091162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp2208536 
End bp2209240 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content64% 
IMG OID638015279 
ProductTetR family transcriptional regulator 
Protein accessionYP_621874 
Protein GI107023547 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.920156 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGTGA CGAGGGGTTG CGGACCCCAT ATTCACTCAA GATCGATCCA ATCAGGCCTG 
CACATGGTCA GACGTACCAA GGAGGAGGCG CTCGAGACGC GCAACCGCAT TCTCGACGCC
GCCGAACACG TGTTCTTCGA GAAAGGCGTG TCGCACACGT CGCTCGCGGA CATCGCCCAG
CACGCCGGCG TGACGCGCGG CGCGATCTAC TGGCATTTCG CGAACAAGAG CGAACTGTTC
GATGCGATGT TCGACCGCGT GTTCCTGCCG ATCGACGAAC TGAAACGGAT GCCGCTCGAC
GCGCCGGGCG GCAATCCGCT CGAGAAGGTG CGCCAGATCC TGATCTGGTG CCTGCTCGGC
GTGCAGCGCG ACCCGCAGCT GCGCCGCGTG TTCAGCATCC TGTTCATGAA GTGCGAATAC
GTCGCGGACA TGGAGCCGCT GCTGCAGCGC AACCGCGCGG GGATGAGCGA GGCGCTGCAC
ATGATCGACG CCGATCTCGC GGTGGCCGTG GGGCTCAAGC TGCTGCCCGA GCGGCTCGAC
ACGTGGCGCG CGACGCTGAT GCTGCACACG CTCGTCAGCG GGTTCGTGCG CGACATGCTG
ATGCTGCCCG ACGAGATCGA CGCCGAGCAG CATGCGGAAA AACTCGTCGA CGGCTGCTTC
GACATGCTGC GCTACAGCCC GGCGATGCTG AAGGATCGCG ACTGA
 
Protein sequence
MTVTRGCGPH IHSRSIQSGL HMVRRTKEEA LETRNRILDA AEHVFFEKGV SHTSLADIAQ 
HAGVTRGAIY WHFANKSELF DAMFDRVFLP IDELKRMPLD APGGNPLEKV RQILIWCLLG
VQRDPQLRRV FSILFMKCEY VADMEPLLQR NRAGMSEALH MIDADLAVAV GLKLLPERLD
TWRATLMLHT LVSGFVRDML MLPDEIDAEQ HAEKLVDGCF DMLRYSPAML KDRD