Gene Bcen_1937 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1937 
Symbol 
ID4091679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp2140669 
End bp2141511 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content68% 
IMG OID638015218 
Producthypothetical protein 
Protein accessionYP_621813 
Protein GI107023486 
COG category[S] Function unknown 
COG ID[COG2912] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0658551 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCGCG TCCTCGACTA CTTCAGCACG CTCGTGGCGG ACGACGACAG TCTGCCCGTC 
ACGGAAGCCG CGCTGTCGCT GGCGCAGGAC GCGTATCCCG ACCTCGACCT GCAGGGCACG
CTGGCCGAAC TCGACATGCT GGCGGCGCGG CTGCGCCGGC GGCTCGCCGA CGATACCGAC
CTGAAGGGCC GCGTCGCCGC GCTGAACGAC TTCTTCTTTC GCGAGCTCGG CTTCGCGTGC
AATCACAACG ATTACTACGA CCCCGATAAC AGCCACCTGA ATGCCGTGCT GAAGCGGCGG
CGCGGGATTC CGATCTCGCT GTCGGTGCTG TACCTGGAGC TCGCCGAGCA GATCGGCGTG
CCGGCGCGCG GCGTATCGTT CCCCGGCCAT TTCCTGCTGC GCGTGACGCT GCCGGATGGC
GACCTGATCA TCGATCCGAC CAACGGCCAT TCGCTGTCCG AAGCCGAGAT GGTCGAGATG
CTCGAGCCGT ACGTCGCGCG GGCGGCGGGG GCGGTCGACA GCGCGTTGCG CGCGCTGCTG
CAGCCCGCGA CGAGCCGCGA GATCATCGCG CGGATGCTGC GCAACCTGAA GACGATCTAT
CTGCAGACGG AGCGCTGGCA GCGGCTGCTC GCGGTGCAGC AGCGGCTCGT GATCCTGCTG
CCCGAGCAGC TCGACGAGGT GCGCGACCGC GGCTTCGCGT ATGCGCGGCT CGACTACCTG
CGCCCCGCGC TCGAGGATCT CGAGCAGTAT CTCGGCGAGC GGCCCGAGGC GGAAGACGCG
ACCGTCGTCG AGTCGCAGGT CAGCGAATTG CGGCAACGGA TGCAGCGCGA CGGCGAGGAT
TGA
 
Protein sequence
MTRVLDYFST LVADDDSLPV TEAALSLAQD AYPDLDLQGT LAELDMLAAR LRRRLADDTD 
LKGRVAALND FFFRELGFAC NHNDYYDPDN SHLNAVLKRR RGIPISLSVL YLELAEQIGV
PARGVSFPGH FLLRVTLPDG DLIIDPTNGH SLSEAEMVEM LEPYVARAAG AVDSALRALL
QPATSREIIA RMLRNLKTIY LQTERWQRLL AVQQRLVILL PEQLDEVRDR GFAYARLDYL
RPALEDLEQY LGERPEAEDA TVVESQVSEL RQRMQRDGED