Gene Bcen_1935 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1935 
Symbol 
ID4091677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp2138859 
End bp2139650 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content70% 
IMG OID638015216 
Product3-deoxy-manno-octulosonate cytidylyltransferase 
Protein accessionYP_621811 
Protein GI107023484 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1212] CMP-2-keto-3-deoxyoctulosonic acid synthetase 
TIGRFAM ID[TIGR00466] 3-deoxy-D-manno-octulosonate cytidylyltransferase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.15984 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCACC CGCCCCCCTT CATCGCCGTC ATTCCCGCCC GGCTCGCGTC GACGCGGCTC 
CCGAACAAGC CGCTCGCCGA TCTCGGCGGC AAGCCGATGG TCGTGCGTGT CGCCGAGCGC
GCGCGCGAAG CGGGCGCGCA ACAGGTGCTC GTCGCGTCCG ACGCGCAGAG CGTGCTCGAC
GCGGCGCGCG ATCACGGCTT CGAAGCGGTG CTCACGCGCG CCGACCATCC GTCCGGCACC
GACCGGCTCG CGGAAGTCGC GGCGGCCTTC GGCTGGCGCG ACGACACCGT CGTCGTCAAC
GTGCAGGGCG ACGAGCCGCT GATCGACCCC GTGCTCGTGC GCGACGTAGC GTCGCACCTG
GCCGCGCATC CGGCGTGCGC GATCGCGACC GCCGCTCACC CGATCCACGA CGCGGCCGAC
GTGTTCAATC CGAACGTCGT GAAGGTCGCG CTCGACGCGC AGAGCGTCGC GCTGTACTTC
TCGCGCGCGC CGATTCCGTG GAGCCGCGAC GCGTACCAGC CGCACTGGCC CGACGTCGCG
GCCATGCCTG CACCGGCTTT CCCGGTCTAT CGGCACATCG GCCTCTATGC GTATCGCGCG
CGTTTCCTGC GCACCTATCC GTCGCTCGCG CAGGCGCCAA TCGAACAGGC CGAGCAGCTC
GAACAGTTGC GCGCGCTGTG GCACGGCGAG CGCATCGCGG TGCTGATCAC CGAATCCGCG
CCCGAAGCCG GCATCGATAC GCCGGCCGAT CTCGCGCGCG TGCAGGCCCT TTTTCAGCCG
GGTTCAAAAT AA
 
Protein sequence
MTHPPPFIAV IPARLASTRL PNKPLADLGG KPMVVRVAER AREAGAQQVL VASDAQSVLD 
AARDHGFEAV LTRADHPSGT DRLAEVAAAF GWRDDTVVVN VQGDEPLIDP VLVRDVASHL
AAHPACAIAT AAHPIHDAAD VFNPNVVKVA LDAQSVALYF SRAPIPWSRD AYQPHWPDVA
AMPAPAFPVY RHIGLYAYRA RFLRTYPSLA QAPIEQAEQL EQLRALWHGE RIAVLITESA
PEAGIDTPAD LARVQALFQP GSK