| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_1924 |
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| Symbol | |
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| ID | 4091666 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia AU 1054 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008060 |
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| Strand | + |
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| Start bp | 2127289 |
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| End bp | 2128938 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638015205 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_621800 |
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| Protein GI | 107023473 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.419907 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCCAG TATTTCGGAC AGTGACGGCA CACGGACAGA TACGGCCGCA GACACTTTTG
GCTGAACTGT ACTGGCCGTC CGACGGGGAC AGGCTTCCCG CAGCCGGTCC GAGCCAGTCC
GGTCGGCGGC CACACGACAT ACCGCGCCGA ACCTGCACGG CGCGGCGGCT TTCCCTACAA
TGTCGGCTGT CCCGCGCCAC CGCCCCCGCC GTCATGTTCC AACGCCCGCC CGCCGCCGCT
CCCGGCGAAA AGAACCTCAC CGTGATGCTC TGGCTCGTTG CGACGGGCTT CTTCATGCAG
ACGCTCGACG CGACGATCGT CAACACGGCG CTGCCGTCGA TGGCCGCGAG CCTCGGCGAA
TCGCCGCTGC GAATGCAATC GGTCGTGATC GCATACTCGC TGACAATGGC GGTGATGATT
CCCGTGTCGG GGTGGCTCGC CGATACGTTC GGCACGCGGC GCGTGTTCTT CAGCGCGATC
CTGGTGTTCT CGCTCGGCTC GCTGCTGTGC GCGAACGCGC ATACGCTGAC GCAACTCGTC
GCGTTCCGCG TGGTGCAGGG GGTCGGCGGC GCGATGCTGC TGCCGGTCGG GCGGCTCGCG
GTGCTGCGCA CCTTTCCGGC CGAACGCTAC CTGCCCGCGC TGTCGTTCGT CGCGATTCCG
GGCCTGATCG GCCCGCTGAT CGGGCCGACG CTCGGCGGCT GGCTCGTGAA GATCGCGTCG
TGGCACTGGA TCTTCCTGAT CAACGTGCCG GTCGGCGTCG CGGGCTGCAT CGCGACCTTC
TATTCGATGC CCGACTCGCG CAACCCGGCC GCCGGCCGCT TCGACCTGAA GGGCTATCTG
CTGCTGACGA TCGGCATGGT CGCGATCTCG CTGTCGCTCG ACGGGCTCGC CGATCTCGGC
ATGCAGCACG CGGCCGTGCT GGTGCTGCTG ATCCTGAGCC TCGCGTGCTT CGTCGCGTAC
GGACTGTACG CGGTGCGCGC GCCGCAGCCG ATCTTCTCGC TGGAGCTGTT CAAGATCCAC
ACGTTCAGCG TCGGGCTGCT CGGCAACCTG TTCGCGCGGA TCGGCAGCGG CGCGATGCCG
TACCTGATCC CGCTGCTGCT GCAGGTGAGC CTCGGCTACT CGGCGTTCGA GGCCGGGCTG
ATGATGCTGC CGGTCGCGGC GGCCGGCATG TTCTCGAAGC GGATCATCAC GCGGCTGATC
ACGCAGCACG GCTATCGCAA GGTGCTGCTC GCGAACACGA TCATGGTCGG CGTGATGATG
GCGAGCTTCG CGCTGATGCG CGACACGGTG CCGGTGTGGG TGAAGGTCGT GCATCTCGCG
CTGTTCGGCG GCTTCAACTC GATGCAGTTC ACCGCGATGA ACACGTTGAC GCTGAAGGAT
CTCGGCACCG GCGGCGCGAG CAGCGGCAAC AGCCTGTTCT CGCTCGTGCA GATGCTGTCG
ATGAGCCTCG GCGTCACGGT CGCCGGCGCG CTGCTCGCAA CGTTCACCGG CATGCTGCGC
ACCGTGACGC CGAGCAACAC GCTGCCGGCG TTCCATGCGA CCTTCATCTG CGTCGGGATC
ATCACGGCCG CGTCCGCGTG GATCTTCGCG CAGCTCGCAC CCGAGATCCG CAGCACCGCG
CGCAAGACCG ACCCGTCCGA GCGCGCGTGA
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| Protein sequence | MTPVFRTVTA HGQIRPQTLL AELYWPSDGD RLPAAGPSQS GRRPHDIPRR TCTARRLSLQ
CRLSRATAPA VMFQRPPAAA PGEKNLTVML WLVATGFFMQ TLDATIVNTA LPSMAASLGE
SPLRMQSVVI AYSLTMAVMI PVSGWLADTF GTRRVFFSAI LVFSLGSLLC ANAHTLTQLV
AFRVVQGVGG AMLLPVGRLA VLRTFPAERY LPALSFVAIP GLIGPLIGPT LGGWLVKIAS
WHWIFLINVP VGVAGCIATF YSMPDSRNPA AGRFDLKGYL LLTIGMVAIS LSLDGLADLG
MQHAAVLVLL ILSLACFVAY GLYAVRAPQP IFSLELFKIH TFSVGLLGNL FARIGSGAMP
YLIPLLLQVS LGYSAFEAGL MMLPVAAAGM FSKRIITRLI TQHGYRKVLL ANTIMVGVMM
ASFALMRDTV PVWVKVVHLA LFGGFNSMQF TAMNTLTLKD LGTGGASSGN SLFSLVQMLS
MSLGVTVAGA LLATFTGMLR TVTPSNTLPA FHATFICVGI ITAASAWIFA QLAPEIRSTA
RKTDPSERA
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