Gene Bcen_1888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1888 
SymbolispH 
ID4093091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand- 
Start bp2084449 
End bp2085429 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content67% 
IMG OID638015169 
Product4-hydroxy-3-methylbut-2-enyl diphosphate reductase 
Protein accessionYP_621764 
Protein GI107023437 
COG category[I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0761] Penicillin tolerance protein 
TIGRFAM ID[TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTACCA CCGATACGCT GTCCGGGCAG ACCGTCGCCG CCGACGCCGA AATCCTGCTG 
GCCCAGCCGC GCGGTTTCTG CGCGGGCGTC GACCGCGCGA TCGAGATCGT CGAGCGCGCC 
ATCGCGATGC ACGGTGCGCC GATCTACGTG CGTCACGAAA TCGTCCACAA CAAGTACGTG 
GTCGAGGATC TGAAGAAGAA GGGCGCGATC TTCGTCGAGG AGCTCGAGGA AGTGCCGGCC 
GGCAACACCG TGATCTTCAG TGCGCACGGC GTGTCGAAAG CCGTGCGCGA CGAGGCCGAC 
GTGCGCGGGC TGCGCATTTA CGACGCAACC TGCCCGCTCG TCACGAAGGT GCACGTCGAA 
GTGGCGAAGA TGCGCCAGGA CGGTGTCGAC ATCGTCATGA TCGGGCACAA GGGCCATCCC 
GAAGTCGAAG GCACGATGGG CCAGGTGGAG CGCGGCATGC ACCTCGTCGA AAGCGTCGAG 
GACGTGCAGA AGCTCGAGCT CGCCGATCCT GAGCGCATCG CGCTCGTCAC GCAGACGACG 
CTGTCCGTCG ACGACGCGGC CGAGATCATC GGCGCGCTGA AGGCGAAGTA TCCGAAGATT 
CGCGAGCCGA AGAAGCAGGA CATCTGCTAC GCGACGCAGA ACCGCCAGGA CGCGGTGAAG 
TTCATGGCGC CGCAATGCGA CGTCGTGATC GTGGTCGGTA GTCCGAACAG CTCGAACTCG 
AGCCGGCTGC GCGAAGTGGC CGAAAAGCGC GGCGTGGCCG CGTACATGGT CGATGCACCG 
GACCAGATCG ATCCCGCATG GGTCGCCGGC AAGCGCCGCA TCGGCGTGAC GGCCGGCGCG 
TCGGCGCCCG AGGCGCTCGC CCAGGCCGTG ATCGCGCGGC TGCGCGAACT CGGCGTGCGC 
AACGTCCGCG CACTCGACGG CATCGAGGAA AACGTGTCGT TTCCGCTGCC GCGCGGGTTG 
AACCTGCCGC CCGCCGCCTG A
 
Protein sequence
MSTTDTLSGQ TVAADAEILL AQPRGFCAGV DRAIEIVERA IAMHGAPIYV RHEIVHNKYV 
VEDLKKKGAI FVEELEEVPA GNTVIFSAHG VSKAVRDEAD VRGLRIYDAT CPLVTKVHVE 
VAKMRQDGVD IVMIGHKGHP EVEGTMGQVE RGMHLVESVE DVQKLELADP ERIALVTQTT 
LSVDDAAEII GALKAKYPKI REPKKQDICY ATQNRQDAVK FMAPQCDVVI VVGSPNSSNS 
SRLREVAEKR GVAAYMVDAP DQIDPAWVAG KRRIGVTAGA SAPEALAQAV IARLRELGVR 
NVRALDGIEE NVSFPLPRGL NLPPAA