| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_1886 |
|---|
| Symbol | |
|---|
| ID | 4093089 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008060 |
|---|
| Strand | - |
|---|
| Start bp | 2082363 |
|---|
| End bp | 2083313 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638015167 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_621762 |
|---|
| Protein GI | 107023435 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATATTT TCGTCCAGCA GGTTCTCAAC GGGCTGGTGC TCGGCAGTGT GTACGCCATC
ATCGCGTTGG GATACACGAT GGTGTACGGC ATTCTCGGCA TCATCAACTT CGCGCACGGC
GACGTGCTGA TGATCGGCGC GATGGTCGCG CTGTCGGCCA TCACCGTGCT GCAGAACCAC
TTTCCCGGAC TCGGCAACGT CGCGACGCTG ACGATCGGCC TGGGCATCGC CGCGGTCGTC
TGTGCGTTCG TCGGCTTCAC CATCGAACGC GTCGCATACC GGCCGCTGCG CCGCGCCCCG
CGTCTCGCCC CGCTGATCAC CGCGATCGGC GTGTCGATCC TGCTGCAGAC CGCTGCGATG
ATCATCTGGT CGCGCAACCC GCTGCCGTTC CCGCAGTTGC TGCCGACCGA CCCGATCAAC
GTGATCAAGG CCACCGACAC GACTCCCGGC GCCGTGATCT CGGTGACTGA AATCGTGATC
ATCGCGGTCG CGTTCATCGT GATGGGCGGC CTGCTGCTGC TCGTGCACAA GACCAAGCTC
GGCCGCGCGA TGCGCGCGAT CGCCGAAAGC CCGAATACGG CGAGCCTGAT GGGCGTGAAC
CCGAACTTCG TGATCTCCGC GACGTTCATG ATCGGCTCCG CGCTCGCCGC GCTGGCCGGC
GTGATGATCG CGTCCGAATA CGGCAACGTG CACTTCTACA TGGGCTTCAT CCCCGGCATG
AAGGCGTTCA CCGCGGCGGT GCTCGGCGGG ATCGGCAACC TCGGCGGCGC GATGGTCGGC
GGCGTGCTGC TCGGCCTGAT CGAGCAGCTC GGGGCCGGCT ACATCGGCAA CCTCACGGGC
GGCGTATTCG GCAGTAACTA CCAGGACGTG TTCGCCTTCG TCGTGCTGAT CATCGTGCTG
GTGTTCCGTC CGTCGGGCCT GCTGGGCGAA CGGGTCGCGG ATCGCGCGTA A
|
|---|
| Protein sequence | MDIFVQQVLN GLVLGSVYAI IALGYTMVYG ILGIINFAHG DVLMIGAMVA LSAITVLQNH
FPGLGNVATL TIGLGIAAVV CAFVGFTIER VAYRPLRRAP RLAPLITAIG VSILLQTAAM
IIWSRNPLPF PQLLPTDPIN VIKATDTTPG AVISVTEIVI IAVAFIVMGG LLLLVHKTKL
GRAMRAIAES PNTASLMGVN PNFVISATFM IGSALAALAG VMIASEYGNV HFYMGFIPGM
KAFTAAVLGG IGNLGGAMVG GVLLGLIEQL GAGYIGNLTG GVFGSNYQDV FAFVVLIIVL
VFRPSGLLGE RVADRA
|
|---|
| |