Gene Bcen_1866 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1866 
Symbol 
ID4093068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp2064078 
End bp2065262 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content71% 
IMG OID638015146 
Productbranched chain amino acid ABC transporter periplasmic ligand-binding protein 
Protein accessionYP_621742 
Protein GI107023415 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCTTC CCGCCCTGTT GCGACGTCCC ACCCTGTTGC GCCGCACCCG CCGCGCCGCC 
GGCGCCGCCC TCGTGCTGGC CTGCGCGGCC GCGCATGCCG ACCTGAAGGT CGGCGTCGAC
CTGTCGTCGA CCGGCCCGGC CGCCGCGATC GGCATCACGA GCAAGAACGC GATCCTGATG
TGGCCGAAGA CGATCGCCGG GCAACCCGTG CAGGTCACGG TGCTCGACGA CGCGTCCGAC
CCGGGCGCGG CGGTACGCAA CATCCGCAAG CTGGTCGACG AGGATCACGT CGACGTCGTG
GTCGGCCCGA ACATCACGCC GGCCGCGCTC GCGGCGCTCG ACGCAGTGGC GGCCGCGCAG
ACGCCGATGA TCACGCTGGT CGGCTCGGGC TCGATCGTCG AGCCGCAGGA GGGCGCGCGG
ACCTGGGCAT TCAAGATGGC GCAGAGCGAC CGCGCGATGG CCGACGTGAT GACCCGCTAC
ATGGCCAACC ACGGCGTGAA GACGGTCGGC TTCATCGGCT TCGCGGACAG CTACGGCGAC
AGCTGGCTCA ACGAATTCAC GCGCTTCGCG GACCTGCGCA AGATCCGCGT GATCGCGACC
GAGCGCTTCA ACCGCACCGA CGCGAGCGTC ACCGGCCAGG CGCTGAAACT GATCGCGGCG
AAGCCGGACG CGATCCTGAT CGCGGGCGCC GGTACGCCGA CCGTGCTGCC GCAGCGCACG
CTGATCGAGC GCGGCTACAA GGGCCCGATC TACCAGACGC ACGGGATCGC GACGCCGGAA
TTCATCAAGC TCGGCGGCAA GGACGTGGAC GGGACGCTGT TTCCGACCCA GCCGGTGGTC
GTCGCCCGCA CGCTGCCGGC CGACCACCCG GCCCGCCAGG CCGCGCTCGC GTTCGTCGAC
GCGTACGAGG CGAAATACGG CGCCGGCACG GTCACGCAGT TCGCGGGCGA TGCGGCGGGC
GTGTACCCGC GCCTCGCCGA TGCGGTCGGC CGCGCGCTGA AAGCGGCGCA ACCCGGCACG
CCCGCGTTCC GCGCGGCGCT GCGCCGCGAG CTCGAACGCG CGCACGAGCT CGTCGTGCCG
AACGGCGTCG TCAATACCAG CGACAAGGAT CACGTGGGGC TCGACCAGCG CGCGAGCGTG
ATGGGGATCG TGAAGCAGGG CCGGTTCGTG TACCTGAGCC AGTAG
 
Protein sequence
MTLPALLRRP TLLRRTRRAA GAALVLACAA AHADLKVGVD LSSTGPAAAI GITSKNAILM 
WPKTIAGQPV QVTVLDDASD PGAAVRNIRK LVDEDHVDVV VGPNITPAAL AALDAVAAAQ
TPMITLVGSG SIVEPQEGAR TWAFKMAQSD RAMADVMTRY MANHGVKTVG FIGFADSYGD
SWLNEFTRFA DLRKIRVIAT ERFNRTDASV TGQALKLIAA KPDAILIAGA GTPTVLPQRT
LIERGYKGPI YQTHGIATPE FIKLGGKDVD GTLFPTQPVV VARTLPADHP ARQAALAFVD
AYEAKYGAGT VTQFAGDAAG VYPRLADAVG RALKAAQPGT PAFRAALRRE LERAHELVVP
NGVVNTSDKD HVGLDQRASV MGIVKQGRFV YLSQ