Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_1792 |
Symbol | |
ID | 4093337 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | + |
Start bp | 1980435 |
End bp | 1981217 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638015072 |
Product | lysine-arginine-ornithine-binding periplasmic protein |
Protein accession | YP_621668 |
Protein GI | 107023341 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAGG CCGCCCTGTG CGCCGCCCTC GCCCTCGTGG CGGGCAGCGC CTTCGCGAAG GAGTGGAAGA CCGTGCGGAT CGGCGTCGAT GCCAGCTACC CGCCGTTCGA GTCGACCGCG CCGAGCGGCG AGATCGTCGG TTTCGACGTC GATCTCACCA AGGAAATCTG CAAGCGGATC AACGTGAAGT GCGTGTGGGT GGCGCAGGAT CTCGACGGGA TCATCCCGGC GCTGAAGGCG AAGAAGTACG ACGTCATCGT GTCGTCGCTG ACCGTGACGG ACAAGCGTCG CGAGCAGATC GACTTCTCCG ACAAGGTGTA CGACGCACCC GCGCGGATGA TCGCGAAAAC CGGCTCGCCG CTGCTGCCGA CGGTCGCGTC GCTCAAGGGC AAGCGCGTCG GCGTCGAGCA GGGCTCCACG CAGGAAACCT ACGCGAAGGC GTACTGGGAA CCGCAGGGCG TGACGATCGT TCCTTACCAG AACCAGGACC AGGTCTATGC CGATCTCGGC ACGGGCCGCC TCGACGCGAC GCTGCAGGAT GAACTGCAGG CCGACTACGG CTTCCTGCGC ACGCCGCGCG GCAAGGGCTT CGCGTTCGCC GGGCCGGAAG TGAAGGATCC GAAGACGATC GGCGACGGCA CCGCGATCGG CCTGCGCAAG GAAGATACCG ACCTGAAGCT GAGAATCAAC CAGGCGCTGG CCGACATGCA CAAGGACGGT ACGTACGACC GGCTGTCGCA CAAGTACTTC TCGTTCAGCG TCTACTCGGC GCCGGCCCGC TGA
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Protein sequence | MKKAALCAAL ALVAGSAFAK EWKTVRIGVD ASYPPFESTA PSGEIVGFDV DLTKEICKRI NVKCVWVAQD LDGIIPALKA KKYDVIVSSL TVTDKRREQI DFSDKVYDAP ARMIAKTGSP LLPTVASLKG KRVGVEQGST QETYAKAYWE PQGVTIVPYQ NQDQVYADLG TGRLDATLQD ELQADYGFLR TPRGKGFAFA GPEVKDPKTI GDGTAIGLRK EDTDLKLRIN QALADMHKDG TYDRLSHKYF SFSVYSAPAR
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