Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_1771 |
Symbol | |
ID | 4092085 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | - |
Start bp | 1962201 |
End bp | 1962782 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638015050 |
Product | ECF subfamily RNA polymerase sigma-24 factor |
Protein accession | YP_621647 |
Protein GI | 107023320 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACCGC CACCCACTTC GCAACCGATG ACCGACTCAG ACCGCGACAT CACTGCGACA GTGATGCGTG AACGAACGAG GCTAGGGAAT TTCATTCGGC GCCGGATTCG CGACCCGGAC GATGCCGAGG ACGTTCTGCA GGATGTGCTT CACGAATTCG TACAGGCTTA TCGACTGCCT GCGCCGATCG AACAGGCGAG CGCGCGGCTG TTCCGTACCG CGCGCAATCG CATCATCGAT CGTTTTCGCA AGAAGAAGGA GCAGCCGCTG ACCGATCTGC TCGGTGTCGA GGACGAAGCG GACAGCGAGT ATCGCCTGGA TCTTGCGCTA CCGTCGCACG ATGCCGGCCC TGAAGCGCTC TACGCTCGCA CGCTGTTACT CAAGGCGTTG CAGGGTGCGC TCGACGAATT GCCGGCGAAT CAGCGCGAGG TTTTCATCGC GCACGAACTG GAAGGGCTGT CGTTCAAGGA GATGGCCGCG CAAAGCGGCG TCACCCTCAA TACGCTGCTC GCGCGCAAAC GCTATGCGGT CCTGCATCTG CGTGCTCGAC TGCAACCCAT TTATGACGAA CTGGATAACT AG
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Protein sequence | MEPPPTSQPM TDSDRDITAT VMRERTRLGN FIRRRIRDPD DAEDVLQDVL HEFVQAYRLP APIEQASARL FRTARNRIID RFRKKKEQPL TDLLGVEDEA DSEYRLDLAL PSHDAGPEAL YARTLLLKAL QGALDELPAN QREVFIAHEL EGLSFKEMAA QSGVTLNTLL ARKRYAVLHL RARLQPIYDE LDN
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