Gene Bcen_1704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1704 
Symbol 
ID4091035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp1889369 
End bp1890931 
Gene Length1563 bp 
Protein Length520 aa 
Translation table11 
GC content68% 
IMG OID638014983 
ProductDEAD/DEAH box helicase-like 
Protein accessionYP_621581 
Protein GI107023254 
COG category[J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG0513] Superfamily II DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCAG GCCCGGCCGG CCTGACGCAC GATGTCCCCG CCGCGCCTTT TGAGCGAAAC 
GCCACCATGT CCGATTCTGT CGCCAAGCCC GTCGACGCAA CCTTCGATCA ATTCGGCCTT
GCCCCCGATA TCCTGAAAGC CATTGTGGAG CAGGGCTATA CGACGCCGAC GCCGATCCAG
GCGCAGGCCA TTCCGGTCGT GCTCGCCGGC CGCGACGTCA TGGGCGCCGC GCAAACGGGC
ACCGGCAAGA CCGCGAGCTT CTCGCTGCCG ATCATCCAGC GTCTGCTGCC GCAGGCCAAC
ACGAGCGCGT CTCCGGCGCG CCACCCCGTG CGGGCGCTGA TCCTCACGCC GACCCGCGAA
CTCGCCGACC AGGTCGCCGC GAACGTGCAC GCATATGCGA AGCACACGCC GCTGCGCAGC
GCGGTGGTGT TCGGCGGCGT CGACATGAAT CCGCAATCGG CCGAACTGCG CCGCGGCGTC
GAGATCCTGA TCGCGACCCC GGGCCGCCTG CTCGACCACG TGCAACAGAA GACGGCGAAC
CTCGGCCAGG TGCAGATCCT CGTGCTCGAC GAAGCCGACC GGATGCTCGA CATGGGCTTC
CTGCCCGATC TGCAGCGCAT CCTGAACCTG CTGCCGAAGG AGCGTCAGAC GCTGCTGTTC
TCCGCCACCT TCTCGGGCGA AATCAAGAAG CTCGCGTCGA CCTATCTGCG CAACCCGCAG
ACGATCGAGG TCGCGCGCAG CAACTCGACG AACGCGAACG TCACGCAGAT CGTCTACGAC
GTCGCCGAAG GCGACAAGCA GGCGGCCGTC GTGCAATTGC TGCGCGATCG CGGCCTCAAG
CAGGTGATCG TGTTCTGCAA CAGCAAGATC GGCGCGAGCC GCCTCGCGCG CAATCTCGAA
CGCGACGGCG TGGTCGCGTC GGCGATTCAC GGCGACAAGA CGCAGATCGA GCGGATGCAG
GCACTCGACG CGTTCAAGCG CGGCGAGATC GAGGCGCTGG TCGCGACCGA CGTGGCCGCG
CGCGGCCTCG ACATCGCCGA GCTGCCGGCC GTGATCAACT TCGACCTGCC GTTCAGCGCG
GAAGACTACG TGCACCGGAT CGGCCGTACC GGCCGCGCGG GCGCGACGGG CGACGCGCTG
TCGCTGTGCA GCCCGAACGA GCGCAAGCAA CTCGCCGATA TCGAGAAGCT GATCAAGCGT
CCGCTCGACG TGCAGACGCT TACGATCGAC AAGCCGGCAC GCCAGCGTCA CGACGAACGT
GGCGGCGAGC GCAACAACAG TGAGCGCGGC GGCGAACGGG GTGGCGAACG CGGCGGTCGG
CGCGATCGCG ACGAGCATCG CGGTGCATCG GGCCGCCGCT CGGGCAGCAC CGAGCGCGGC
GGCCATCATC GCCGCCACGA AGCACCGGTC GACGATTTCT TCCTGAAGCC GTACGAGCCG
TCGGCGTCGG CGAAGCAGCC GGACGATGCG CAGCCCGCGC AGCAGCCCGA GAAGAAAGGG
CCGAAGCGCC AGGTTGCCGC GCTGCTCGGT GGCTTCGGGA TGCCGCGCAA GCCGTCGGCG
TAA
 
Protein sequence
MSAGPAGLTH DVPAAPFERN ATMSDSVAKP VDATFDQFGL APDILKAIVE QGYTTPTPIQ 
AQAIPVVLAG RDVMGAAQTG TGKTASFSLP IIQRLLPQAN TSASPARHPV RALILTPTRE
LADQVAANVH AYAKHTPLRS AVVFGGVDMN PQSAELRRGV EILIATPGRL LDHVQQKTAN
LGQVQILVLD EADRMLDMGF LPDLQRILNL LPKERQTLLF SATFSGEIKK LASTYLRNPQ
TIEVARSNST NANVTQIVYD VAEGDKQAAV VQLLRDRGLK QVIVFCNSKI GASRLARNLE
RDGVVASAIH GDKTQIERMQ ALDAFKRGEI EALVATDVAA RGLDIAELPA VINFDLPFSA
EDYVHRIGRT GRAGATGDAL SLCSPNERKQ LADIEKLIKR PLDVQTLTID KPARQRHDER
GGERNNSERG GERGGERGGR RDRDEHRGAS GRRSGSTERG GHHRRHEAPV DDFFLKPYEP
SASAKQPDDA QPAQQPEKKG PKRQVAALLG GFGMPRKPSA