Gene Bcen_1561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1561 
Symbol 
ID4092673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp1736666 
End bp1737385 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content68% 
IMG OID638014835 
Producttwo component transcriptional regulator 
Protein accessionYP_621439 
Protein GI107023112 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.932075 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACCAAC CGAAACGCAT CCTGATCGTC GAGGACGACG CCGACATCGC CGACGTGCTG 
AGCCTGCACC TGCGCGACGA GCGCTACGAG GTCGTGCACA GCGCGGACGG CGCCGAAGGG
TTGCGCCTGC TCGAACAGGG CAACTGGGAC GCGCTGATCC TCGACCTGAT GCTGCCGGGC
GTCGACGGCC TCGAAATCTG CCGGCGGGCG CGGGCGATGA CGCGCTATAC GCCGATCATC
ATCACGAGCG CGCGGTCGAG CGAGGTGCAT CGAATCCTCG GCCTCGAACT CGGCGCCGAC
GACTACCTCG CGAAACCGTT CTCGGTGCTC GAACTTGTCG CGCGCGTGAA GGCGCTGCTG
CGGCGCGTCG ATGCGCTCGC ACGCGATTCG CGGATCGACG CGGGCACGCT CGACGTCGCG
GGGCTGGCGA TCGATCCGAT CGCACGCGAG GCGAGCGTCG ACGGCGCACG CCTCGACCTG
ACGCCGCGCG AATTCGACCT GCTGTATTTC TTCGCGCGGC ACCCAGGCAA GGTGTTCTCG
CGGATGGACC TGCTGAACGC TGTGTGGGGC TATCAGCACG AAGGCTACGA ACATACGGTC
AACACCCACA TCAACCGGCT GCGCGCGAAG ATCGAGGCCG ATCCGGCCGA GCCGGTGCGC
ATCCTCACCG TGTGGGGGCG CGGCTACAAG CTCGCCGCGC CGGGCCAGCG GGACGCGTGA
 
Protein sequence
MDQPKRILIV EDDADIADVL SLHLRDERYE VVHSADGAEG LRLLEQGNWD ALILDLMLPG 
VDGLEICRRA RAMTRYTPII ITSARSSEVH RILGLELGAD DYLAKPFSVL ELVARVKALL
RRVDALARDS RIDAGTLDVA GLAIDPIARE ASVDGARLDL TPREFDLLYF FARHPGKVFS
RMDLLNAVWG YQHEGYEHTV NTHINRLRAK IEADPAEPVR ILTVWGRGYK LAAPGQRDA