Gene Bcen_1552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1552 
Symbol 
ID4092664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp1723917 
End bp1724771 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content67% 
IMG OID638014826 
Product3-hydroxybutyryl-CoA dehydrogenase 
Protein accessionYP_621430 
Protein GI107023103 
COG category[I] Lipid transport and metabolism 
COG ID[COG1250] 3-hydroxyacyl-CoA dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCATCG AAACCGTCGG CGTCGTGGGC GCCGGAACCA TGGGTAACGG CATTGCGCAA 
ACCGCCGCCG TTGCAGGACT GAACGTCGTG ATGATCGACG TCAGCGACGC CGCGCTCGAC
AAGGGCCTCG CGACGCTCAA GGGTAGCCTC GAGCGGCTCG TGTCGAAGGA CAAGCTCGCG
GCCGACGCCC GCGATGCGGC GCTCGCGCGC ATCACGACGT CGACCGACTA CGCGAAGCTC
GCCGCCGTCG ACATCGTGAT CGAAGCCGCG ACCGAGAACG TCGAGCTGAA GGGGCGCATC
CTGAAGCAGA TCGAGGCCGT CGCGCGTCCG GACGCGATCA TCGCGACCAA CACGTCGTCG
ATCTCGATCA CCGCGCTCGC GGCGCCGCTC GCCGATCCGT CGCGTTTTCT CGGCATGCAC
TTCTTCAACC CGGTGCCGCT GATGCCGCTC GTCGAGATCA TCCGCGGGCT GCAGACGAGC
GACGCGACCG CGTCGGCCGT GCGCGCGCTG ACCGAGCGTT TCGACAAGTC GCCGATCGGC
GTGCGCAACT CGCCGGGCTT CGTCGTGAAC CGGATCCTGG TGCCGATGAT CAACGAAGCG
TTCTTCGTGC TGGCCGAAGG CATCGCGTCG GCCGAGGAGA TCGACGCGGG GATGAAGCTC
GGCGCGAACC ACCCGATCGG GCCGCTCGCG CTGGCCGACC TCGTTGGCCT CGACGTGTGC
CTCGCGGTGA TGGACGTGTT CGTGAAGGAC TTCGGCGATC CGAAGTATCG TGCGTGCCCG
CTGCTGCGCG AGATGGTGTC GGCCGGGCGG CTCGGGCGCA AGACCGGGCG TGGGGTGTAC
GACTACAGCA AGTAA
 
Protein sequence
MAIETVGVVG AGTMGNGIAQ TAAVAGLNVV MIDVSDAALD KGLATLKGSL ERLVSKDKLA 
ADARDAALAR ITTSTDYAKL AAVDIVIEAA TENVELKGRI LKQIEAVARP DAIIATNTSS
ISITALAAPL ADPSRFLGMH FFNPVPLMPL VEIIRGLQTS DATASAVRAL TERFDKSPIG
VRNSPGFVVN RILVPMINEA FFVLAEGIAS AEEIDAGMKL GANHPIGPLA LADLVGLDVC
LAVMDVFVKD FGDPKYRACP LLREMVSAGR LGRKTGRGVY DYSK