Gene Bcen_1549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1549 
Symbol 
ID4092661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand- 
Start bp1721812 
End bp1722297 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content69% 
IMG OID638014823 
Productintegral membrane protein 
Protein accessionYP_621427 
Protein GI107023100 
COG category[S] Function unknown 
COG ID[COG5500] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.462747 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGCGT TCGTGACTTC AGCGTTGCTG TGGGGTTCGG CCATTGGCTG CGGGTTGATG 
GCCGGCGTGT ACTTCGCGTT CTCGACGTTC GTGATGACGT CGCTCGGACG GCTCGCACCG 
CAGGCCGGCG CGGCCGCGAT GAATGCGATC AACGTCGACA TCGTGCGTTC GCCGTTCATG 
CCGCTGTTCC TCGGCACGAC GCTGATGGCG CTCGCGCTCG TCGTGATCGC GCTGTTCGAT 
CGCGACTCGC CGGGCGCGAT GGCGGCGCTC GCCGGCGGCG TGCTCTACGT GTTCGGCATG 
TTCGCGGTGA CGATGGCCGT CAACGTGCCG CTCAACGACG CGCTCGCCGC GGCCGATCCG 
GCCACGGCGC AAGGCGCGGC GCTGTGGACG CGCTACCTGC ACGACTGGAC GAGGTGGAAT 
CACGTGCGCA CGGTGGCGTC GGCCGCCGCA TGCGCATGCT TCATCGCGGC AATCGCGGCG 
CGCTAG
 
Protein sequence
MIAFVTSALL WGSAIGCGLM AGVYFAFSTF VMTSLGRLAP QAGAAAMNAI NVDIVRSPFM 
PLFLGTTLMA LALVVIALFD RDSPGAMAAL AGGVLYVFGM FAVTMAVNVP LNDALAAADP 
ATAQGAALWT RYLHDWTRWN HVRTVASAAA CACFIAAIAA R