Gene Bcen_1532 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1532 
Symbol 
ID4092644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp1704101 
End bp1705288 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content68% 
IMG OID638014806 
ProductBNR repeat-containing glycosyl hydrolase 
Protein accessionYP_621410 
Protein GI107023083 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4692] Predicted neuraminidase (sialidase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACGA ACCTCGTTGA AGCGGCCAGC GCCGCGTCCG ATCATTGCGT TCGCACGGCC 
TATGCCGACG CGGAACGGCA AGAGGCGTTT CTGCCCGCCG CCTGCGTGCA GAACCACGCG
GCCAACCTGC ACTGCCTCGA CAACGGCGAC CTGCTGTGCG TGTGGTTCGG CGGCACGCAG
GAGGGCATTC CCGACGTGTC GATCTACCTG TCGCGTCTTG CGGCCGGGAC CGACGAATGG
TCCGCGCCGC GCAAGCTGTC GGACGACCCG ACCCGCTCCG AACAGAACCC GGTGCTGTTC
ACCGCGCCCG ACGGCCGCCT GTGGCTGATC TACACCGCGC AGTTGTCCGG GCATCAGAAC
ACCGCGATCG TGCGTCGCCG CGTGTCGACG GACGGCGGCC TCACGTGGGG CCCCGTCGAC
ACGCTGTTCG ACCGGCCGGG GACGTTCGTG CGCCAGCCGA TCGTCGCGCT CGACGACGGC
ACGTGGATCT GCCCGATCTT CCTGTGCCGC ACGGAGCCCG GCGAGCGCTG GGTCGGCAAC
GACGACGTCA GCGCGGTGAT GGTGTCCGAC GACCAGGGTC GGACGTGGAC GCCGCACGAA
GTGCCGGACA GCGTCGGGTG CGTGCACATG AACGTTCACG TGCTGCACGA TGGGTCGCTG
CTGGCCCTCT ACCGCAGCCG CTGGGCGGAC TTCGTCCACG CGAGCCGCTC GACCGACGGC
CGTACCTGGA GCGCGCCCGA GCGCACCGAC TTGCCGAACA ACAACTCGTC GATCCAGTTC
ACGGTGCTGC AGAACGGTCA TCTCGCGCTC GTGTTCAACG AAAGCGACGC GTCGCACGGC
AAGGAGCGCC GTGCTTCGCT GTACGACGAC ATCGACGACT CGGAGGACAG CGGCGAGCTG
CGCGACCAGC AGGCGTCCGT GCGCGGCACC GCGTTCTGGG GCGCGCCGCG CGCGCCGATG
TCGCTCGCCA TCTCGGAGGA CGGCGGCCGG ACGTGGCCGC GCCGCCGCAA CCTCGAAATC
GGCGACGGGT ATTGCATGAC GAACAACTCG GCCGACCAGC GCAACCGCGA ATACTCGTAT
CCGTCGATCG TGCAGTCGCG GGACGGCGCG TTGCACATCG CGTTCACCTG GTTCCGCCAG
AAGATCAAGT ACGTGCGCGT CGACGAAACA TGGGTTCGCG GCCGATGA
 
Protein sequence
MSTNLVEAAS AASDHCVRTA YADAERQEAF LPAACVQNHA ANLHCLDNGD LLCVWFGGTQ 
EGIPDVSIYL SRLAAGTDEW SAPRKLSDDP TRSEQNPVLF TAPDGRLWLI YTAQLSGHQN
TAIVRRRVST DGGLTWGPVD TLFDRPGTFV RQPIVALDDG TWICPIFLCR TEPGERWVGN
DDVSAVMVSD DQGRTWTPHE VPDSVGCVHM NVHVLHDGSL LALYRSRWAD FVHASRSTDG
RTWSAPERTD LPNNNSSIQF TVLQNGHLAL VFNESDASHG KERRASLYDD IDDSEDSGEL
RDQQASVRGT AFWGAPRAPM SLAISEDGGR TWPRRRNLEI GDGYCMTNNS ADQRNREYSY
PSIVQSRDGA LHIAFTWFRQ KIKYVRVDET WVRGR