Gene Bcen_1515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1515 
Symbol 
ID4092031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp1682686 
End bp1683963 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content62% 
IMG OID638014790 
Productextracellular solute-binding protein 
Protein accessionYP_621394 
Protein GI107023067 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGGCAA AAACAAGATT GCGGCATATT TCGGCACGGG CGGTCGTATC GACCGTCGCG 
AGCCTTTCGA TGGTCGGCAT GGCCGGTGCG CAGGCGCAAA CGGTCGAGGT CGTTCATCAA
TGGACCTCCA GCAGTGAAGC CTACGCGCTC CAGGCGCTCA AGGACGCGTT GCAGAAGAAG
GGCATCGGCT GGAAAGACAG CGCGATCGCC GGCAACGACG GCGCCAATCA ACAACAGGCA
TTGCAGGCGC GGCTGGCGGC AGGGAGCGCG CCGGCAGCGG CGCAGGCCCA GCCGCAGCTG
CTTTTTTCGT ATGCCGAACA AAATGAGCTC ACGAATCTCG ACAGCCTCGC GAAGGCCGGC
AACTGGGACA AGCTGATCGC GCCCGAGCTG ATTCCGTACG TGAAATACAA GAACGACTGG
TACGGCGTTC CGGTCAACGA GCACCGCGAG AACATGTTCT GGATCAACGC CAAGATCCTG
CAGAAGTACG GCGGCAAAGC CCCGACCACC TGGGATGAAT TCAACGCGCT GGCCGAGCGC
ATGAAGAAGG ACGGCATCAT CCCGGTCGCG CTGGGCGGCG AGGACTGGCA GGAAGCGGAG
ATCTTCAGCG ATCTCGTGAT CGGCATCGGC GGCCCCGCCT TTTACAAGAA GGCGATCATC
GATCACGACC CCGCGACGAT CCAGGGGCCC ACCATGCTCA AGGTGTTCGA CCAATTGCGC
AAGATCATCG GCTTCACGGA TCCGAACCGC GCCGGTCGCG ACTGGAACGT GGCGACGCAA
ATGGTCATCG ACGGCAAGGC GGCGATGCAG ATCCATGCGG ACTGGGCCAA GGGCGAATTC
CTCCGGGCAG GCAAGAAGCC GGGCATCGAC TTCGTGTGCG CGGCGACGCC GGGAAGCGGT
CACGCGTTCG TATGGGTCGT GGACACCATG ACGTTCTTCA AACAGAAGAA TCCCGCTGCC
GCCGCCAATC AGGCGACGCT CGCCAATCTG GCCATGAGCG CCGACGTGCA GGCGAACTTC
AATCTGCGCA AAGGTTCGAT CCCCGCGCGG CTCGACGTGC CGCAAGCGAA ATTCGACGAC
TGCGCCAAGC TGAATTTCGC CGACCGAGCC GCGGCCGCCC AATCCGGCGC GGTCGTGCCG
TCGTTCATCG AGAATGCCGC ATTGGAGCGT GACGTTCGCG CATCGTTCGT CGATGTGATC
ACGCAATTCG TGAACACCCC GTCGATGACT TCCGCCACTG CCGTCAAGAA GCTGGCAGCC
GCGGCGAAGA ACAACTGA
 
Protein sequence
MKAKTRLRHI SARAVVSTVA SLSMVGMAGA QAQTVEVVHQ WTSSSEAYAL QALKDALQKK 
GIGWKDSAIA GNDGANQQQA LQARLAAGSA PAAAQAQPQL LFSYAEQNEL TNLDSLAKAG
NWDKLIAPEL IPYVKYKNDW YGVPVNEHRE NMFWINAKIL QKYGGKAPTT WDEFNALAER
MKKDGIIPVA LGGEDWQEAE IFSDLVIGIG GPAFYKKAII DHDPATIQGP TMLKVFDQLR
KIIGFTDPNR AGRDWNVATQ MVIDGKAAMQ IHADWAKGEF LRAGKKPGID FVCAATPGSG
HAFVWVVDTM TFFKQKNPAA AANQATLANL AMSADVQANF NLRKGSIPAR LDVPQAKFDD
CAKLNFADRA AAAQSGAVVP SFIENAALER DVRASFVDVI TQFVNTPSMT SATAVKKLAA
AAKNN