Gene Bcen_1375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1375 
Symbol 
ID4091969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp1510609 
End bp1512915 
Gene Length2307 bp 
Protein Length768 aa 
Translation table11 
GC content72% 
IMG OID638014650 
Productmulti-sensor hybrid histidine kinase 
Protein accessionYP_621254 
Protein GI107022927 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.397027 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGAAA TTGCACGGCC GCAGGCCGGA AATTACGCAA CGGCCGTGAT GCTGGTCGCG 
ATCGCGACCG TGTTGCAGAC GCTCGCGATC CGGTTCGGCG GCGTGAATCT GCCGTTCGTG
CTGTATTACC CGCTGCTGGC CGGCGCTGCG TGGGCGACGT CGTTCGTGTT CGGCATCGTG
TCGACGGTGG TCAGCGGGCT GCTCGTCTGG ACGCTGTTCC TGTCCGATCC GGCCGCCTAT
ACGACGCCGC TGCCCGACCG GCTCGTGCAG CTCGGCACGT TCATCCTGAT CGGCGCGCTA
GTGTGCGCGG TCGCGTCGCT GCTGCATCAC ACGCGGCTGA CGAACGATCG CGCGCGCCGA
CGCGAGGCGG CCGCGCGCCG GCAGTTCGAG GCCGTGCTGC GCGCCCTGCC GCACGGCGTG
ATCGCGACCG ACCCGAACGG GCGGCTCACC TATCTCAACG CGGCCGCGGC CGAACTCGTC
GGCTGCCGGC CGGACGAGGC GGTGGGGCGG CCGGTGCGCG ACGTGCTGCG CATCGTCGAT
CACGAAGGCC GCCGCGTGCC GACCACGCCG CTCGACCGTG CGCTCGGCGG CGCCGAGGCG
ACGTCCGACC GGCACTGGCT GCAGGCCGGC AGCGGCGATC GGGTGCCGAT CGTCGCGGTC
GCGTCGCCGA TCGGCGATGC GGACGGCAAC CTGGACGGCG CGGTGCTGCT GCTGCGCGAT
GCCGGCGCGG ACCGCGCGCG TGTCGATGCG TCGCGGCTCC AGCATGCGGT CGTCGAGGCG
TCGCCGGACG CGATCGTCGG GATCGACGCC GACGGCCGCA TCGCCAGCTG GAACGCGGCT
GCGCAGCGGA TCTTCGGCTA CGACGAGGCC GACGCGCGCG GCCGCAGGTT CGACACGCTG
ATCGCGCGGC GCTGGCTGCG GCTCAATCCG CTCGCCGACG CGTTCGACGC GATGCACGAG
CCGGTCGGGC CGCTCGAACT GTTGTGCGTG CGGCGCGACG GGCGGCGCTT TCGGGCGACG
GTATCGGCGT GCCCGGTGCA GGGCGAGGCG CGGGCGTGCG TCACGCTGTC CCTGACGCTG
CACGAAACCG GCGCGCAGCG TCGCCGCGAC CTGCGGGCGC AGCGCTCGCT GCAGGGCGCG
CGCGATGCAC GCGATCAGGC CGACACGTCG AACCGGCTGA AGGACGAGCT GCTGGCCACG
GTGTCGCATG AATTGCGCAC GCCGCTGAAC GTGATCTACG GGTGGATCGA GGTGCTGCGC
AATACGGGCG ATCACGCGTT GCAGCATCAG GCGATCGACG CGATCGACCG CAGCGCGCGT
TCGCTCACGC GGATGGTCGG CGACATCCTC GATGCGTCGT CGCTCGCGAC CGGCAAGCTG
CGGCTCGACG CGACGCCGGT CGACGTCGTG CGGTTGTTCT CCGACCAGGT CGGCACGTTC
CAGACCGCCG CCTCGTCGGC CGGCATCCTG CTCGAATTCG ACTGCGCCGC GTCCGCGTGC
ATCGTGTCGG GCGACGCCGA GCGGTTGCGG CAGATGCTGT CGAACCTCAT CTCGAATGCG
CTGAAATTCA CGCCGGGCGG CGGCAGCGTG ACGGTCGGCC TCGCGCGCGA CGGCGGGCAC
GCGGTGTTGA CCGTCGCCGA TACGGGGCAG GGCATCGCGA CGGAGTTCAC GCCGTACGTG
TTCGACATGT TCCGCCGCGC GGACGATTCG CCCGCGTCGC CGCGGCGCGG GCTCGGTCTC
GGCCTGTCGA TCGTTCGTCA CATCGCGCAA CTGCACGGCG GCAACGTGAC CGTCGCGAGC
GCGGGCCGCG ACCGCGGCAC GACGTTCACG GTGACGCTGC CGGCCGGCTG GCAGCCGGGC
GGCGCGATGG CGTGGAGCAT CGTGCAGGCG GGCGGGCAGC GCGAGGCGCT CGTGCTCGAT
ACGCAGCGCA TCCTGATCGT CGACGACGAC GCGACCACGC GGGCCAGTCT CACCGCCGCG
CTGACCACGT TCGGCGCGGC GGTCGCGATC GCGTCGTCGG GCCGCGAGGC GCTCGCGATG
GTGGCCGACA TGCGGCCGAC GGTCGTGCTG TCCGACCTCG CGATGCCCGA CGGCGACGGC
TTCTGGCTGC TGGAGGCCTT GCGGCGCGGC ACGACGAACG GCGACAGCGG CCCGCTCGAC
GTGCGCGTGC TGGCCGTCAC CGCGCACGCG GGCCTCGCCG ACGAACGCCG CGCGCTGGAG
GCCGGCTTCG ACGGCTACCT GTGCAAGCCG GTCGACGTGC GCGAACTGGC GCACAAGATC
GCGCACGTGA CGAAGCGCGA CGGCTGA
 
Protein sequence
MTEIARPQAG NYATAVMLVA IATVLQTLAI RFGGVNLPFV LYYPLLAGAA WATSFVFGIV 
STVVSGLLVW TLFLSDPAAY TTPLPDRLVQ LGTFILIGAL VCAVASLLHH TRLTNDRARR
REAAARRQFE AVLRALPHGV IATDPNGRLT YLNAAAAELV GCRPDEAVGR PVRDVLRIVD
HEGRRVPTTP LDRALGGAEA TSDRHWLQAG SGDRVPIVAV ASPIGDADGN LDGAVLLLRD
AGADRARVDA SRLQHAVVEA SPDAIVGIDA DGRIASWNAA AQRIFGYDEA DARGRRFDTL
IARRWLRLNP LADAFDAMHE PVGPLELLCV RRDGRRFRAT VSACPVQGEA RACVTLSLTL
HETGAQRRRD LRAQRSLQGA RDARDQADTS NRLKDELLAT VSHELRTPLN VIYGWIEVLR
NTGDHALQHQ AIDAIDRSAR SLTRMVGDIL DASSLATGKL RLDATPVDVV RLFSDQVGTF
QTAASSAGIL LEFDCAASAC IVSGDAERLR QMLSNLISNA LKFTPGGGSV TVGLARDGGH
AVLTVADTGQ GIATEFTPYV FDMFRRADDS PASPRRGLGL GLSIVRHIAQ LHGGNVTVAS
AGRDRGTTFT VTLPAGWQPG GAMAWSIVQA GGQREALVLD TQRILIVDDD ATTRASLTAA
LTTFGAAVAI ASSGREALAM VADMRPTVVL SDLAMPDGDG FWLLEALRRG TTNGDSGPLD
VRVLAVTAHA GLADERRALE AGFDGYLCKP VDVRELAHKI AHVTKRDG