Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_1368 |
Symbol | |
ID | 4091962 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | - |
Start bp | 1504555 |
End bp | 1505412 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638014643 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_621247 |
Protein GI | 107022920 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00277313 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCACCG CACAGACTCC CCCGCCGCAG AAACAGACGC AGCAGCCGGG CACGGAGCGC GACATGCATC CGAAGCCGCG CGACGAGGCG GCCGACTACG TCGGCAGCGG CAAGCTCGCC GGCAAGGTCG CGCTGGTGAC GGGCGGCGAC AGCGGGATCG GCCGCGCCGT GGCGGTCGGT TTCGCGAAGG AGGGCGCGGA CGTCGCGATC GTCTACCTGA AGGAATCCGA CGACGCCGCG CACACGAAGC AACTGATCGA GCAGGCCGGC CGACGCTGCG AGGCGATCGC GTGCGACGTC GGCGATCGCC GGCAGGCGCG CGATGCGGTC GCCCGCACGG TCGAGCGGCT CGGCCGGCTC GACGTGCTCG TGAACAATGC GGGCGAGCAG CATCCGCAGC CGGGCATCGA GGACGTGTCC GAGGAACAGC TCGAGCGCAC GTTCCGCACC AACGTATACG GGATGTTCTT CTGCACGCAG GCCGCGCTGC CCCACCTGAA GGAAGGCGGC CGCATCGTCA ACACGGCGTC GGTCACTGCT TATCACGGCA GCCCGAAACT GCCCGACTAT TCGGCGACCA AGGGCGCGAT CGTCGCGTTC ACGCGCTCGC TGTCGATCGA GCTGGCCGAA CGCGACATCC GCGTGAACGC GGTCGCGCCG GGGCCGATCT GGACGCCGCT GATTCCGTCG ACGTTCACGC CCGAGCAGGT CGCGAAATTC GGCTCGAACG TGCCGCTCAA GCGGCCGGGC CAGCCGGACG AACTGATCGA CTGCTACGTG CTGCTCGCGT CGGACGGCGC GAGCTACATG ACCGGGCAGA CGCTGCATCC GAACGGCGGC TCGATCGTCG GCGGCTGA
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Protein sequence | MTTAQTPPPQ KQTQQPGTER DMHPKPRDEA ADYVGSGKLA GKVALVTGGD SGIGRAVAVG FAKEGADVAI VYLKESDDAA HTKQLIEQAG RRCEAIACDV GDRRQARDAV ARTVERLGRL DVLVNNAGEQ HPQPGIEDVS EEQLERTFRT NVYGMFFCTQ AALPHLKEGG RIVNTASVTA YHGSPKLPDY SATKGAIVAF TRSLSIELAE RDIRVNAVAP GPIWTPLIPS TFTPEQVAKF GSNVPLKRPG QPDELIDCYV LLASDGASYM TGQTLHPNGG SIVGG
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