Gene Bcen_1345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1345 
Symbol 
ID4091939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp1484398 
End bp1485720 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content72% 
IMG OID638014620 
Productsodium/hydrogen exchanger 
Protein accessionYP_621224 
Protein GI107022897 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0025] NhaP-type Na+/H+ and K+/H+ antiporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.492042 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACGAAA CCCTCTGGTA TCTGATCATC GGCGCCGTGC TGCTGGGCAT GGGCGTCGTG 
ACGTCCGCGC TGCGCCACCT GCCCTGCAGC TCGGCGATGA TTTACCTGGT GCTCGGCGTC
GCGCTCGGTC CGGCCGGCGC CGGCCTGCTG CATCTCGACC TCGAACGCGA CGGGCAACTG
CTGCGCGAGA TCGTCGAAGT CGCGCTGCTC GTGTCGCTGT TCGCGATCGG GCTGCGGCTG
CGCGTGCCGC TGTCCGACAA GCTGTGGCTC GTGCCGTGCC GCCTCGGGCT GCTCGCGATG
ATCGTCACCG TGCCGCTGCT CGCCGCGTGC GCGGTGCTCG CGCTGGGCCT TGGCTGGGGC
CCCGCGTTGC TGCTCGCGGC GATCCTCGCG CCGACCGACC CCGTGCTCGC GCACGACGTG
CAGGTGCACG ATCCGGGCGA TCGCGACCTG GTGCGCTTCG CGTTGTCCGG CGAAGGCGGA
ATGAACGACG GCATCGCGCT GCCGTTCGCG CTCGCGGGGC TCGCGCTGTG CGGCGCACCG
GGTGCGACGC ACGGCATCCC GCCGCTGTCC GGCACGTTCG CCCTCGTCGC GCTGTGGGGC
ATCGCGGGCG CGGCCGCGAT CGGCGGCGGG CTCGGCTGGG CCACGACGAA GACGATCGGC
TGGCTGCGCA CGCGGCACGC GCAGGCGCTC GGCCTCGAAG GCTTCTTCGC GCTCGCGCTG
ATCGTGCTGT CGTTCGGCGC CGCGCAGCTC GCGCACACGT TCGGCTTCAT CGCGACGTTC
GCGGCCGGCG TCGCGATGCG GCGCGTCGAG CATCGCGCGA GCGGCGACCG CCCGCCGCGC
GAAGTGATCG GCCAGATCGA TTCGGAAGAC GTGGTCGCGA CCGAGAAGCA TCCGGAGAAA
GCGCATGCGT TCATGGCCGA ATCGGTGCTC GGCTTCACGA TCGAGCTCGA ACGGATCGCC
GAAGCGATCG TGATGACGAT GATCGGCAGC GTGCTCTCGA CGCTGCCCGG CCCGCTGCTC
ACGTGGGGCG CCGTCGCGCT GGCCGCCGTG CTGTTCGTCG CCGTGCGTCC GCTCGCGGTG
CTGGTCACGC TGGCCGGCTC GCGCGCGACG CATGCGCAGC GGCGGCTGAT GGCGTGGTTC
GGCATCCGCG GGATCGGCTC GTTCTACTAC CTCCTGTTCG CGCTCGAGCA CGGGCCGTCC
GACGTCGTGC GCCCGCTCGC GGCGCCGGTG CTGGCCGTGG TGTCCGCGTC GGTGGTCGCG
CACGGGATTT CCGCGACGCC GCTGATGAAC TGGTACTACC GGTTGCAGCA GCATCGGCGC
TGA
 
Protein sequence
MHETLWYLII GAVLLGMGVV TSALRHLPCS SAMIYLVLGV ALGPAGAGLL HLDLERDGQL 
LREIVEVALL VSLFAIGLRL RVPLSDKLWL VPCRLGLLAM IVTVPLLAAC AVLALGLGWG
PALLLAAILA PTDPVLAHDV QVHDPGDRDL VRFALSGEGG MNDGIALPFA LAGLALCGAP
GATHGIPPLS GTFALVALWG IAGAAAIGGG LGWATTKTIG WLRTRHAQAL GLEGFFALAL
IVLSFGAAQL AHTFGFIATF AAGVAMRRVE HRASGDRPPR EVIGQIDSED VVATEKHPEK
AHAFMAESVL GFTIELERIA EAIVMTMIGS VLSTLPGPLL TWGAVALAAV LFVAVRPLAV
LVTLAGSRAT HAQRRLMAWF GIRGIGSFYY LLFALEHGPS DVVRPLAAPV LAVVSASVVA
HGISATPLMN WYYRLQQHRR