Gene Bcen_1334 details

Gene Information

• Locus tag: Bcen_1334
• ID: 4091429
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia cenocepacia AU 1054
• Kingdom: Bacteria
• Replicon accession: NC_008060
• Strand: +
• Start bp: 1472589
• End bp: 1474460
• Gene Length: 1872 bp
• Protein Length: 623 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 638014609
• Product: malto-oligosyltrehalose trehalohydrolase
• Protein accession: YP_621213
• Protein GI: 107022886
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0296] 1,4-alpha-glucan branching enzyme
• TIGRFAM ID: [TIGR02402] malto-oligosyltrehalose trehalohydrolase

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.0628361
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACATCCC GTTCCGCCCG CCCCACCGGC ACGCATGTAT TCGAATCGTC GTTCGGCGCG 
ACCTGCATCG AGGCCGACCG CACGCGCTTC CGGCTATGGG CGCCCGCGAG CCGCACCGCC 
GCCGTCGAGC TGCAGGACGC AGGCGGCCGC GCGATCCCGA TGACGCCTGC CGGCGACGGC 
TGGTTCGAGA CGGTCGCGCC GTGCGGCCCC GGCACGCTGT ACCGCTACCT GCTCGACGAC 
GCGCTGGCGG TGGCCGATCC CGCGTCGCGC TTCCAGCCGT ACGACGTGCA CGGCCCGAGC 
CAGGTCGTCG ATCCGGCTGC GTACCGCTGG CGCCACGACG CGTGGCGCGG CCGCCCGTGG 
CACGAAACGG TGCTCTACGA GCTGCATGTC GGCGCATGCG GCGGCTACGC GGCCGTCGAG 
CGGCGCCTGC CGGCGATCGC CGAACTCAGC GTGACCGCCG TCGAGCTGAT GCCCGTCAAT 
GCGTTTCCCG GCGCACGCAA CTGGGGCTAC GACGGCGTGC TGCCGTTCGC GCCCGACGCG 
TCGTACGGGC GGCCCGAGGA ACTGAAATCG CTGGTCGACA GCGCGCACGG GCTCGGGCTG 
CAGGTATTCC TCGACGTCGT ATACAACCAC TTCGGCCCCG ACGGCAACCT GCTGCCGCGC 
TACGCACCCG ACTTCTTCCG CGCGGACCGG CAGACTGCGT GGGGGCCGGC GATCGACTTC 
ACCCGCCCGC AGACGAGCGC GTTCTTCATC GACAACGCGC TGTACTGGCT GGACGAGTAC 
CGCTTCGACG GGCTGCGCAT CGACGCCGCG CACGCGATCG ACGACGACGC ATGGCTGCGC 
GAACTCGCGC GCCGCGTGCG CGCGCAGGCA GGCGACGCGC GCCACGTGCA TCTCGTGCTG 
GAGAACGAGC GCAATACCGC GAGCCTGCTC GGCCCCGGCG GCTTCGACGC GCAATGGAAC 
GACGACTTCC ACAACAGCGC GCACGTGCTG CTGACCGGCG AGCGCGACGG TTACTACCGC 
GCGTACGCCG ATGCGCCGCT GCGCCATTTC GCGCGCACGC TCGGCGAAGG CTTCGCGTAC 
CAGGGCGACC CGTCGCCGCT GCACGACGGC GCCGCGCGCG GCGAGCCGAG CGCGCACCTG 
CCGCCGACCG CGTTCGTCGT GTTCCTGCAG AACCACGACC AGGTCGGCAA CCGCGCGTTC 
GGCGAACGGC TGCGCGCGCT CGCGAACGAC GATGCGGTGC GCGCGGCCAC CGCGCTGATG 
CTGCTCGCGC CGTCGATCCC GCTGCTGTTC ATGGGCGAGG AAGACGGCAG CACGCAGCCG 
TTCCAGTTCT TCACCGACTA TCGCGGCGCG CTCGCCGATG CGGTGCGCGA AGGCCGGCGC 
CGCGAATTCG CCGCGTTTCC CGCGTTCGCC GACGCCGCCC ATCGCGACGC GATTCCCGAC 
CCGAACGACA TCGCGACCTT CGTGCGCTCG TCGTCGCACC ATCCGCCCGA CGAGTCGTGG 
CCCGACGCGG CCGCCTGGCG GCGCTTCTAC CGCAGCGCGC TGGCCGTGCG CGCGGCGCTC 
GTGACGCCGC ATCTGGAGAA CGCGCGGTCG CTCGGCGTCG AACTGCTCGC GGGCGACGGC 
GACCCGCCCG CACTGGTCGC GCGCTGGCGC CTCGGCGACG GCAGCACGCT GACGATCGCG 
CTGAATCTCG GCTCGCACGA CGCGACGCTG CCCGCGCTGC CGGTCGGCAA GATCGTGTTC 
GAGACGCCGC CGCGGGCGCG CGACCGGCTG CCCGGCGGGC ACGTGCCGCC CCGCGCCTGC 
ATCGTATGGC GCGACGGCGC GGTCAACCGG GATGCGCGGC ATCACAGCAC GAACGGACGG 
AGCCTCTCAT GA 

 

Protein sequence

MTSRSARPTG THVFESSFGA TCIEADRTRF RLWAPASRTA AVELQDAGGR AIPMTPAGDG 
WFETVAPCGP GTLYRYLLDD ALAVADPASR FQPYDVHGPS QVVDPAAYRW RHDAWRGRPW 
HETVLYELHV GACGGYAAVE RRLPAIAELS VTAVELMPVN AFPGARNWGY DGVLPFAPDA 
SYGRPEELKS LVDSAHGLGL QVFLDVVYNH FGPDGNLLPR YAPDFFRADR QTAWGPAIDF 
TRPQTSAFFI DNALYWLDEY RFDGLRIDAA HAIDDDAWLR ELARRVRAQA GDARHVHLVL 
ENERNTASLL GPGGFDAQWN DDFHNSAHVL LTGERDGYYR AYADAPLRHF ARTLGEGFAY 
QGDPSPLHDG AARGEPSAHL PPTAFVVFLQ NHDQVGNRAF GERLRALAND DAVRAATALM 
LLAPSIPLLF MGEEDGSTQP FQFFTDYRGA LADAVREGRR REFAAFPAFA DAAHRDAIPD 
PNDIATFVRS SSHHPPDESW PDAAAWRRFY RSALAVRAAL VTPHLENARS LGVELLAGDG 
DPPALVARWR LGDGSTLTIA LNLGSHDATL PALPVGKIVF ETPPRARDRL PGGHVPPRAC 
IVWRDGAVNR DARHHSTNGR SLS