Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_1217 |
Symbol | |
ID | 4093429 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | - |
Start bp | 1340752 |
End bp | 1342215 |
Gene Length | 1464 bp |
Protein Length | 487 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638014493 |
Product | major facilitator transporter |
Protein accession | YP_621097 |
Protein GI | 107022770 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.207678 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAGCC AATCCCTCGA CCTAGGCGGC CATGCCGGCG GCCCTGAATC CGCCCGGCCG CCGGCCGCTT CAGCAGGCGC CGGCGCCGAT GCGGCAGCCC TTCCCGGCCG CCGCGTCACG CTCGGCGATT TCATGGACGA TCTGCCGGTC GGCGCATTGC ATCGATTCGT CGTCTGGGTA ATCGGCGTCG GGCTGTTCTT CGACATGTAC GAGATTTTTC TCGTCAGTAC GATCGGCTCC GCGTTGCAGC ACGAATACGG GCTGAGCCGG CAAAGCGCCG ATTTCAAGCT ATTGCTGGCG TCGGCGTTCA TCGGCATGTT CGTCGGCGCG ATGTGCCTTG GCAGCCTGGC CGACCGCATC GGCCGGCGCA AGGCGTTCCT GCTCACGCTC GGGTGGTACA GCGCGTTCTC GCTGGTCGGT GCGTTTTCCG TGAACGCCGA CATGCTCGTG GCATGCCGGT TCCTGACGGG CATCGGCGTC GGCGCGATCT ATCCGGTCGC CGACAGCTTC CTGTCCGAAA TCCTGCCGAA GGACAAGCGC GGGCGGCTCG CCGCGTGGGC CTACACGACT TCGTATGTCG CGGTGCCGCT CGTCGGCTTT CTCGCGCTGT GGCTGAATCC GTTGCAGGTG GCGGGCGTCG CCGGCTGGCG CATCATCCTC GCGATCGGCA GCCTCGGCGC CGTGTACGTG CTGCTCGTCC AGCACCGGCT GCCGGAAAGC CCGCGCTGGC TGCTCGCGCA AGGCCGCACG GCCGATGCGC ACGCGGCGCT GCGGCGTTTC GCGGAAAGCG CCGGCGTGCG TGTGCCCGAA CACTTCGCGG AACCGGTCGA GCCGCAGCGG CCGCTCGGGC TCGGCGAGCG CATCGCGCTG CTACGCCGCC AACCGTATGG CGCCCGCTAT GTGATGCTGG CGATCTTTCA CCTGTTGCAG GGCTTCGGCT ACTACGGGTT CGGCACGCTG GCCGGCACGG TCGTGAAAAG CCGCGGCTTC GACGTGACGG ACAGCACGCT GTTCATCGCG CTGTCGTTCA TCGGCTATCC GATCGGCTCG CTGCTGTCGA TTCCGCTGCT CAACTGGATC GAGCGCCGCA CGCTCGTGAT CGTGTCGATC CTGTCGATCG CGGTGTTCGG GCTGTGCTTC GCGTATTCGG GCAATACGAT GCTGATCGTC GGCTTCGGGT TCCTGACGAC CTGTGCGTCG AACGTGTTCA GCAACGCGTA TCACGTGTAT CAGGCCGAGA TTTTCCCGGC GCGCGTGCGC TCGACGGCGA TCGGCAGTAC CTATGCGCTG TCGCGGATCG TGAGCGGCGC GCTGCCGTTC GTGTTGCTGC CGGTGCTCGG CCACTACGGC GCGGGCGCGA TGTTCGGCGT GATCTCGGTC GCACTCGGCA TCGTCGCCGT CACGCTGCGC GTGCTCGGGC CGCTGACCAC GCGGCGCAGC CAGGACGAGA TCAATCCGGT TTGA
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Protein sequence | MNSQSLDLGG HAGGPESARP PAASAGAGAD AAALPGRRVT LGDFMDDLPV GALHRFVVWV IGVGLFFDMY EIFLVSTIGS ALQHEYGLSR QSADFKLLLA SAFIGMFVGA MCLGSLADRI GRRKAFLLTL GWYSAFSLVG AFSVNADMLV ACRFLTGIGV GAIYPVADSF LSEILPKDKR GRLAAWAYTT SYVAVPLVGF LALWLNPLQV AGVAGWRIIL AIGSLGAVYV LLVQHRLPES PRWLLAQGRT ADAHAALRRF AESAGVRVPE HFAEPVEPQR PLGLGERIAL LRRQPYGARY VMLAIFHLLQ GFGYYGFGTL AGTVVKSRGF DVTDSTLFIA LSFIGYPIGS LLSIPLLNWI ERRTLVIVSI LSIAVFGLCF AYSGNTMLIV GFGFLTTCAS NVFSNAYHVY QAEIFPARVR STAIGSTYAL SRIVSGALPF VLLPVLGHYG AGAMFGVISV ALGIVAVTLR VLGPLTTRRS QDEINPV
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