Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_1159 |
Symbol | |
ID | 4093385 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | - |
Start bp | 1261542 |
End bp | 1263365 |
Gene Length | 1824 bp |
Protein Length | 607 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638014435 |
Product | cyclic peptide transporter |
Protein accession | YP_621039 |
Protein GI | 107022712 |
COG category | [P] Inorganic ion transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4615] ABC-type siderophore export system, fused ATPase and permease components |
TIGRFAM ID | [TIGR01194] cyclic peptide transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.216015 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCTCGC CCCGCCGCTT TCGCGTCAGA TTTGCCGTTT CCGCGTTATT GCCTGCCTTC CCTTTACCGA CGTTGCCGAT GACAGCCGCC CACGAGCCTT CTTCCCCGCC GTCCCTCGAC GCTCCCCCCG GCCGCCCCGC GGCGCGCCTG ATCCTTGCGC TGCTGCGCGA AAGCCGCGTG TCGCTCACGC TGGCGCTCAC CGCATGCGTG CTGAACGGCG TCGCGAGCGT GCTGCTCGTC GCGACGCTGA ACCGCGCGCT GTCACAACCG GGCGCCGCCG ACGCGGCGCT CGCGTGGCGC TTCGCCCTGT GCGCGGTGAT CGCGCTCGTC ACGCGGATCG TGTCGGGCAC GCTGTTCGCC CGCCTGTCGC AGGACACGAT GGCGCGCTTG CGCGTGCATC TGGCGCGGCG CGTCGGCGCG GCCGAGCTGC GCGACATCGA GCGGATCGGC GCGGCGCCCG TGCAGTCGGT GCTGACCGAC GACGCGACCA ACGTGTCGAT GCTGTTCTTC GCGCTGCCGA ACCTGGTCAT GCACGGCTCG ATCGTGTTCG GCTGCCTCGG CTATCTGGCG TGGCTGTCGT GGCCCGTGTG CCTGCTGGCG CTGGCCGCGA TCATCGCCGG CTCGCTCGGC TATCACACCG GCGATCGCCG CGCGATCGCG GCGCTCGAAG CCGCCGGCCA GGCGCAGGAC CGCCTGTTCG GCTATCTCGG CTCACTGTTC TCCGGCGCGA AGGAGCTGAA GCTGCACGAT GCGCGCGCCC GCCAGTTCGT CGACGGCCAG CTCGGCGCCG CGATCGGCGA AGTGCGCGAC CACCGCCGCC GCGCGTTCAG CGCGTACGCG GTCGGGGTCG GCTGGATCAT CTTCCTGTTC TACGTGTTCC TCGGCGTCGC GTCGTTCTGG CCGCAGCTCG GCGTGCATGC CGATCCGGCC ACGGCGGCCG GCTACGTCGT CGTGTTCCTG TTCATGCTCG TGCCGCTCGA CGGCCTGCTG AACAACCTGC CGACCGTCAA TGCGGCGCGC GTGTCGCTCG GGCGGATCGA AGGCGTGATG GCCGAATTCG GCGCGCTGCG CACGGTGCCG CCCGCGGCCG ATGCGCCCGA CGTGCCGCCG GCCGGCGCCG TCACGCTGCG CGGCGTCACG CACGCGTATT TCCACGAACG CGACGAACGG ATGTTCAGCA TCGGGCCGAT CGACCTGACG ATCAAGCCGG GCGAGCTCGT GTTCATCGTC GGCGGCAACG GCAGCGGCAA GACCACGCTC GCGAAGGTGC TGACCGGGCT CTACGAGCCC GAGCAAGGCA CGATCGAGGT CGACGGCCGC ACGATCGGCT GGCGCGAGCG CGCGGCCTAC CGGCAGCGCT TCAGCGCGGT GTTCAACGAT TTCCACCTGT TCGATGCGCT GCTCGGCATC GTCGACCCCG ACGATCCGTC GCGTGCGCAG GCCGATGCAC GGGCGAACGC GCTCGTCGCG AAACTCGCGC TCGATCACAA GGTGAAGGTG GTCGACGGCG CGTTCTCGAC GCGCGCGCTG TCGACCGGCC AGCGCAAGCG GCTCGCGCTC GTCGTCGCGT ACCTGGAAGA TCGCCCGTTC TACCTGTTCG ATGAATGGGC GGCCGACCAG GACCCGTCGT TCAAGGCCGT GTTCTACGAG CAACTGCTGC CGGAGCTGCG CGCGCGCGGC AAGGCCGTGA TCGTGATCAC GCACGACGAC CGCTACTTCA ACCTCGCCGA CCGTCTGCTG AAGCTCGACA ACGGGCGCAT CGTCAGCGAT ACGCAACCGG CGCGCCTGCG TGCGCAGGAT GGCGTCGATG CGCTGAGCGC GTAA
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Protein sequence | MGSPRRFRVR FAVSALLPAF PLPTLPMTAA HEPSSPPSLD APPGRPAARL ILALLRESRV SLTLALTACV LNGVASVLLV ATLNRALSQP GAADAALAWR FALCAVIALV TRIVSGTLFA RLSQDTMARL RVHLARRVGA AELRDIERIG AAPVQSVLTD DATNVSMLFF ALPNLVMHGS IVFGCLGYLA WLSWPVCLLA LAAIIAGSLG YHTGDRRAIA ALEAAGQAQD RLFGYLGSLF SGAKELKLHD ARARQFVDGQ LGAAIGEVRD HRRRAFSAYA VGVGWIIFLF YVFLGVASFW PQLGVHADPA TAAGYVVVFL FMLVPLDGLL NNLPTVNAAR VSLGRIEGVM AEFGALRTVP PAADAPDVPP AGAVTLRGVT HAYFHERDER MFSIGPIDLT IKPGELVFIV GGNGSGKTTL AKVLTGLYEP EQGTIEVDGR TIGWRERAAY RQRFSAVFND FHLFDALLGI VDPDDPSRAQ ADARANALVA KLALDHKVKV VDGAFSTRAL STGQRKRLAL VVAYLEDRPF YLFDEWAADQ DPSFKAVFYE QLLPELRARG KAVIVITHDD RYFNLADRLL KLDNGRIVSD TQPARLRAQD GVDALSA
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