Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_1115 |
Symbol | |
ID | 4093775 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | - |
Start bp | 1211309 |
End bp | 1212142 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638014391 |
Product | ABC transporter |
Protein accession | YP_620995 |
Protein GI | 107022668 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
TIGRFAM ID | [TIGR01291] ABC-2 type transporter, NodJ family |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGTTC GCAACTATTC CACCACCACG CCGTCGGCCC CGCTGCGCGA GTCGCGCTTC GCGATCGCGA TGCCGGCGAA CGCAAGCAAC TGGATCGCCG TCTGGCGGCG CAACTATCTC GTGTGGCGCA AGCTCGCGCT CGCATCGATG TTCGGCAATC TCGCCGATCC GATGATCTAT CTGTTCGGGC TGGGGTTCGG GCTCGGGCTG ATGCTCGGCC ATGTCGACGG CGTGTCGTAT ATCGCGTTCC TCGCGGCCGG CACGGTCGGC TCGAGCGTGA TGATGTCCGC GAGCTTCGAG TCGATGTATT CGGGATTCTC GCGGATGCAC GTGCAGCGCA CGTGGGAAGC GATCATGCAT ACGCCGCTCG CGCTCGGCGA CATCGTGCTC GGCGAGATCG TGTGGGCGGC CAGCAAGGCG CTGCTGTCGG GCGGCGCGAT CATGCTCGTC GCGGGCGGGC TCGGCTATGC GCAGTTTCCG TCGATGCTCG CCGCGCTGCC GGTGATCGCG CTGGCCGGCC TCGCGTTCGC CAGCATCGCG ATGATCGTCA CGGCGCTCGC GCCGTCCTAC GATTTCTTCA TGTTCTACCA GACGCTCGTG CTGACGCCGA TGCTGCTGCT GTCGGGCGTG TTCTTCCCGA TCACGCAGTT GCCGCCGCTT GCGCAGCACG CGGCGCAGGC GCTGCCGCTC GCGAATGCGG TCGAACTGAT CCGGCCCGCG ATGCTCGGCC GGCCGGCGAC CGACATCGCG CTGCACGTCG CGGTGCTCGC CGGTTACGCG GTCGGCGGAT TCCTGCTGTC CGCGTGGCTG TTCCGGCGGC GGATGATGCG CTGA
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Protein sequence | MDVRNYSTTT PSAPLRESRF AIAMPANASN WIAVWRRNYL VWRKLALASM FGNLADPMIY LFGLGFGLGL MLGHVDGVSY IAFLAAGTVG SSVMMSASFE SMYSGFSRMH VQRTWEAIMH TPLALGDIVL GEIVWAASKA LLSGGAIMLV AGGLGYAQFP SMLAALPVIA LAGLAFASIA MIVTALAPSY DFFMFYQTLV LTPMLLLSGV FFPITQLPPL AQHAAQALPL ANAVELIRPA MLGRPATDIA LHVAVLAGYA VGGFLLSAWL FRRRMMR
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