Gene Bcen_0978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_0978 
Symbol 
ID4090922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp1069934 
End bp1071034 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content68% 
IMG OID638014249 
Productchorismate synthase 
Protein accessionYP_620860 
Protein GI107022533 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0082] Chorismate synthase 
TIGRFAM ID[TIGR00033] chorismate synthase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGGCA ATACCCTCGG CACGCTTTTC ACTGTCACGA CCTTCGGCGA ATCGCACGGT 
CCCGCGATCG GCTGCGTGAT CGACGGCTGC CCGCCGGGGA TGGGACTGAC CGAAGCCGAT
ATCCAGATCG AACTCGATCG CCGCAAGCCG GGCACGTCGC GGCACGTGAC GCAACGGCAG
GAGGCCGACG AGGTCGAGAT CCTGTCGGGC GTGTTCGAAG GCGTGACGAC CGGCACGCCG
ATCGCGCTGC TGATCCGCAA CACCGACCAG CGCAGCAAGG ACTACGGCAA CATCGTCGAG
ACGTTCCGTC CCGGCCACGC CGACTACACC TACTGGCAGA AATACGGCAT CCGCGACTAC
CGCGGCGGCG GTCGCTCGTC CGCGCGCCTC ACCGCGCCGA TCGTCGGCGC CGGTGCGGTC
GCGAAGAAGT GGCTGCGCGA GCGCTTCGGG GTCGAGGTGC GCGGCTACAT GAGCGGCCTC
GGCGAAATCG ACGTGCCGTT CGTCGACTGG TCGCACGTGC ACGAGAATCC GTTCTTCTCG
CCGAACGCGG CGGTCGTGCC GGAGCTCGAG GCGTACATGG ACGCGCTGCG CAAGGATGGC
GATTCGATCG GCGCGCGCAT CGACGTCGTC GCATCGGGCG TGCCGGTCGG CTGGGGCGAA
CCGGTATTCG ACCGGCTCGA TGCCGATATC GCGAAGGCGA TGATGAGCAT CAACGCGGTG
AAGGGCGTCG AGATCGGCGC GGGCTTCGAC AGCGTCGCGC AGCGCGGCTC GGTGCATGGC
GACGAACTGA CGCCGGCCGG CTTCGTCGGC AACCACGCGG GCGGCGTGCT CGGCGGGATT
TCGACGGGGC AGGACATCAC CGTGTCGATC GCGATCAAGC CGACGTCGAG CATCCGCACG
CCGCGCCGCT CGATCACGAA GAGCGGCGAC GAGGCGACGG TCGAAACCTT CGGCCGCCAC
GATCCGTGCG TCGGCATTCG CGCGACGCCG ATCGCCGAAT CGATGCTCGC GCTGGTGCTG
ATCGACCATG CGCTGCGCCA TCGCGCGCAG TGCGGCGACG TCGAGACGTC GACGCCGAAG
ATTGCCGGCA GCGCGACCTG A
 
Protein sequence
MSGNTLGTLF TVTTFGESHG PAIGCVIDGC PPGMGLTEAD IQIELDRRKP GTSRHVTQRQ 
EADEVEILSG VFEGVTTGTP IALLIRNTDQ RSKDYGNIVE TFRPGHADYT YWQKYGIRDY
RGGGRSSARL TAPIVGAGAV AKKWLRERFG VEVRGYMSGL GEIDVPFVDW SHVHENPFFS
PNAAVVPELE AYMDALRKDG DSIGARIDVV ASGVPVGWGE PVFDRLDADI AKAMMSINAV
KGVEIGAGFD SVAQRGSVHG DELTPAGFVG NHAGGVLGGI STGQDITVSI AIKPTSSIRT
PRRSITKSGD EATVETFGRH DPCVGIRATP IAESMLALVL IDHALRHRAQ CGDVETSTPK
IAGSAT