| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_0964 |
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| Symbol | |
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| ID | 4092910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia AU 1054 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008060 |
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| Strand | - |
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| Start bp | 1055574 |
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| End bp | 1056449 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638014235 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_620846 |
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| Protein GI | 107022519 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000197103 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTCTCA GAAAACTCTT CGGCTTCGTC GCGACCGCCA TCATCCTTCT CGTCGCGATC
CTGATCGGGC GCTCGCTGTG GGTGCACTAC ATGGATGATC CGTGGACGCG CGACGGGCGC
GTGCGCGCCG AGATCGTCAA CGTCGCGCCG GACGTGTCGG GCGCGATCGT CGAGCTGCCC
GTGCATGACA ACCAGCTCGT GAAGAAAGGC GACCTGATCA TGCAGATCGA CCCGTCGCAC
TACCAGATCG CGGTCGAGCA GGCGCAGGCG GCGGTGGCCG CCCGCCGCGC GGAACTGCAG
ATGCGCCGCG ACGACGCGGC CCGCCGCGCG GACCTCGATG CGCTCGTCGT GTCGAAGGAA
AACCGCGAGA ACGCCGCGCA CAGCGCATCG AGCGCCGACG CACAGTATCA GCAGGCGCTC
GCCGCGCTCG ACGCCGCGAA GCTCAACCTC GAGCGCACGC GCGTCGTCGC GCCGGTCGAC
GGCTACATCA CGAACCTGCA GACCTTCAAG GGCAACTATG CGGTGGCCGG CCAGGCGAAG
CTCGCGATCG TCGACAGCCA CTCGTTCTGG GTCTACGGCT ACTTCGAGGA AACCAAGCTG
CCGCGCGTGA AGATCGGCGC ACCGGCCGAA ATGCGGCTGA TGAGCGGCGG CGTGATGAAG
GGCCACGTGG AAAGCATCTC GCGTGGTATC TACGATCGCG ACAACCCGCA AAGCCGCGAC
CTCGTCGCCG ACGTGAACCC GACCTTCAAC TGGGTGCGCC TCGCGCAGCG CGTGCCGGTA
CGCATCAAGA TCGACGAAGT GCCGGCCGAC GTGGTGCTGT CGGCGGGCAC GACCTGCACG
GTCATCATCG ATCCCGACAA GCAGAAGAAG TCGTAA
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| Protein sequence | MILRKLFGFV ATAIILLVAI LIGRSLWVHY MDDPWTRDGR VRAEIVNVAP DVSGAIVELP
VHDNQLVKKG DLIMQIDPSH YQIAVEQAQA AVAARRAELQ MRRDDAARRA DLDALVVSKE
NRENAAHSAS SADAQYQQAL AALDAAKLNL ERTRVVAPVD GYITNLQTFK GNYAVAGQAK
LAIVDSHSFW VYGYFEETKL PRVKIGAPAE MRLMSGGVMK GHVESISRGI YDRDNPQSRD
LVADVNPTFN WVRLAQRVPV RIKIDEVPAD VVLSAGTTCT VIIDPDKQKK S
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