Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_0811 |
Symbol | carB |
ID | 4091564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | + |
Start bp | 876039 |
End bp | 879293 |
Gene Length | 3255 bp |
Protein Length | 1084 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638014081 |
Product | carbamoyl phosphate synthase large subunit |
Protein accession | YP_620694 |
Protein GI | 162218056 |
COG category | [E] Amino acid transport and metabolism [F] Nucleotide transport and metabolism |
COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCAAAAC GCACAGACAT CAAGAGCATC CTCATCATCG GCGCCGGCCC GATCATCATC GGCCAGGCGT GCGAGTTCGA CTATTCGGGC GCGCAGGCTT GCAAGGCGTT GCGTGAGGAG GGCTACAAGG TCGTTCTCGT CAACAGCAAC CCGGCGACGA TCATGACCGA CCCGAACACG GCCGACGTGA CCTACATCGA GCCGATCACG TGGGAAGTCG TCGCACGCAT CATCGAGAAG GAGCGCCCGG ACGCGATCCT GCCGACGATG GGCGGCCAGA CCGCGCTGAA CTGCGCGCTC GACCTGCACC ACCACGGCGT GCTCGAGAAG TTCGGCGTCG AGCTGATCGG CGCGTCGCCG GAAGCGATCG ACAAGGCGGA AGACCGCCAG AAGTTCAAGG AAGCGATGAC CAAGATCGGT CTCGGTTCCG CGAAGTCGGG CATCGCGCAC TCGATGGAAG AGGCGACCAA GGTCCACGCC GAGATCATGG CGGAGACGGG CGGCAGCGGC TACCCGGTCG TGATCCGCCC GTCGTTCACG CTCGGCGGCT CGGGCGGCGG CATCGCGTAC AACCGCGAAG AGTTCGAAGA GATCTGCAAG CGCGGTCTCG ACCTGTCGCC CACGCGCGAG CTGCTGATCG AAGAGTCGCT GCTCGGCTGG AAGGAATACG AGATGGAAGT CGTGCGCGAC CGCGCCGACA ACTGCATCAT CGTCTGCTCG ATCGAAAACC TCGACCCGAT GGGCGTGCAC ACCGGCGACT CGATCACGGT AGCGCCTGCG CAGACGCTCA CCGACAAGGA ATACCAGATC CTGCGTAACG CATCGCTCGC GGTGCTGCGC GAGATCGGCG TCGACACGGG CGGCTCGAAC GTGCAGTTCT CGATCAACCC GCGGGACGGC CGCATGGTCG TCATCGAGAT GAACCCGCGC GTGTCGCGTT CGTCGGCGCT CGCATCGAAG GCGACCGGCT TCCCGATCGC GAAGGTCGCG GCGAAGCTGG CGGTCGGCTA CACGCTCGAC GAGCTGAAGA ACGAAATCAC CGGCGGCCAG ACGCCGGCGT CGTTCGAGCC GACGATCGAC TACGTCGTCA CGAAGATTCC GCGTTTCGCG TTCGAGAAGT TCCGCGAAGC CGATTCGCGC CTGACCACGC AGATGAAGTC GGTCGGCGAA GTGATGGCGA TCGGCCGCAC GTTCCAGGAA TCGTTCCAGA AGGCGCTGCG CGGCCTCGAA GTCGGTGTCG ACGGCCTCGA CGAGAAGTCG ACCAACCGCG ACGAGATCGC GATCGAGATC CACGAGCCGG GTCCGGACCG CATCTGGTAC GTCGGCGATG CGTTCCGCAT CGGCATGACG GCCGAGGAAA TCTTCGCGGA AACCGCGATC GATCCGTGGT TCCTCGAGCA GATCGAGCAG ATCATCCTGA AGGAAAAGGC GCTGTCGGGC CGCACGCTCG CGTCGCTGAC GTTCGACGAG CTGCGCTACC TGAAGCAGAG CGGCTTCTCC GACCGCCGCC TCGCGAAGCT GCTCGGCGCG ACGCCGGAAG ACGTCCGCAA GCGTCGCGTC GAACTGAACG TGCGCCCGGT CTACAAGCGC GTCGACACGT GCGCGGCCGA GTTCGCGACG AAAACCGCCT ACATGTACTC GACCTATGAG GAAGAGTGCG AGGCGCAGCC GACCACGAAC AAGAAGATCA TGGTGCTGGG CGGCGGCCCG AACCGGATCG GCCAGGGCAT CGAGTTCGAC TACTGCTGCG TGCACGCGGC GCTCGCGATG CGCGAGGACG GCTATGAAAC GATCATGGTC AACTGCAACC CGGAAACGGT GTCGACCGAC TACGACACGT CCGACCGCCT GTACTTCGAG CCGCTGACGC TCGAGGACGT GCTCGAGATC GTCGACAAGG AAAAGCCGGT CGGCGTGATC GTCCAGTATG GTGGCCAGAC GCCGCTGAAG CTCGCGCTCG ACCTCGAGGC GCACGGCGTG CCGATCGTCG GCACGTCGCC GGACATGATC GACGCGGCCG AAGACCGCGA ACGCTTCCAG AAGCTGCTGC AGGACCTCGG CCTGCGCCAG CCGCCGAACC GCACCGCGCG CGCCGAAGAC GAAGCGCTCG CGCTGGCCGA CGAAATCGGC TACCCGCTGG TCGTGCGTCC GTCGTACGTG CTCGGCGGCC GCGCGATGGA AATCGTCCAC GAGCCGCGCG ACCTCGAGCG CTACATGCGC GAGGCCGTGA AGGTGTCGAA CGATTCGCCG GTGCTGCTCG ACCGCTTCCT GAACGACGCG ATCGAGTGCG ACGTCGACTG CATCTGCGAC GGCGAAGCCG TGTTCATCGG CGGCGTGATG GAGCACATCG AGCAGGCGGG CGTCCACTCG GGCGATTCGG CATGCTCGCT GCCGCCGTAC TCGCTGTCGA AGGAAACCGT GGCCGAGCTG AAGCGCCAGA CGGGCGCGAT GGCGAAGGCG CTGAACGTGG TCGGCCTGAT GAACGTGCAG TTCGCGATCC AGCAGGTGCC GCAGGCGGAC GGCTCGAAGC AGGACATCAT CTACGTGCTG GAAGTGAACC CGCGCGCGTC GCGCACGGTG CCGTACGTGT CGAAGGCGAC CAGCCTGCCG CTCGCGAAGA TCGCGGCGCG CGCGATGGTC GGCCAGAAGC TCGCGCAGCA GGGCGTGACG AAGGAAGTCG AGCCGCCGTA CTTCAGCGTG AAGGAAGCGG TGTTCCCGTT CGTCAAGTTC CCGACCGTCG ATCCGGTCCT CGGGCCTGAA ATGCGCTCGA CCGGCGAAGT GATGGGCGTC GGCCAGACGT TCGGCGAAGC GCTGTTCAAG TCGCAGCTCG CCGCCGGTTC TCGCCTGCCG GAGTCGGGCA CGGTGCTGCT GACCGTGATG GACGCGGACA AGCCGAAGGC CGTCGAAGTC GCGCGCATGC TGCACGACCT CGGCTACCCG ATCGTCGCGA CCAAGGGCAC GGCTGCCGCG ATCGAAGCGG CCGGCGTGCC GGTGAAGGTC GTGAACAAGG TGAAGGACGG CCGTCCGCAC ATCGTCGACA TGATCAAGAA CGGCGAGATC GCACTCGTGT TCACGACGGT CGACGAGACG CGCCAGGCGA TCGCCGATTC GCGCTCGATC CGCATGAGCG CGCAGGCGCA CAAGGTCACG TACTACACGA CGATGTCGGG CGCGCGCGCG GCCGTTGAAG GCTTGCGCTA CCTGAAGGAT CTGGAAGTCT ATGATTTACA AGGTCTTCAC GCTCGCCTAA ACTAA
|
Protein sequence | MPKRTDIKSI LIIGAGPIII GQACEFDYSG AQACKALREE GYKVVLVNSN PATIMTDPNT ADVTYIEPIT WEVVARIIEK ERPDAILPTM GGQTALNCAL DLHHHGVLEK FGVELIGASP EAIDKAEDRQ KFKEAMTKIG LGSAKSGIAH SMEEATKVHA EIMAETGGSG YPVVIRPSFT LGGSGGGIAY NREEFEEICK RGLDLSPTRE LLIEESLLGW KEYEMEVVRD RADNCIIVCS IENLDPMGVH TGDSITVAPA QTLTDKEYQI LRNASLAVLR EIGVDTGGSN VQFSINPRDG RMVVIEMNPR VSRSSALASK ATGFPIAKVA AKLAVGYTLD ELKNEITGGQ TPASFEPTID YVVTKIPRFA FEKFREADSR LTTQMKSVGE VMAIGRTFQE SFQKALRGLE VGVDGLDEKS TNRDEIAIEI HEPGPDRIWY VGDAFRIGMT AEEIFAETAI DPWFLEQIEQ IILKEKALSG RTLASLTFDE LRYLKQSGFS DRRLAKLLGA TPEDVRKRRV ELNVRPVYKR VDTCAAEFAT KTAYMYSTYE EECEAQPTTN KKIMVLGGGP NRIGQGIEFD YCCVHAALAM REDGYETIMV NCNPETVSTD YDTSDRLYFE PLTLEDVLEI VDKEKPVGVI VQYGGQTPLK LALDLEAHGV PIVGTSPDMI DAAEDRERFQ KLLQDLGLRQ PPNRTARAED EALALADEIG YPLVVRPSYV LGGRAMEIVH EPRDLERYMR EAVKVSNDSP VLLDRFLNDA IECDVDCICD GEAVFIGGVM EHIEQAGVHS GDSACSLPPY SLSKETVAEL KRQTGAMAKA LNVVGLMNVQ FAIQQVPQAD GSKQDIIYVL EVNPRASRTV PYVSKATSLP LAKIAARAMV GQKLAQQGVT KEVEPPYFSV KEAVFPFVKF PTVDPVLGPE MRSTGEVMGV GQTFGEALFK SQLAAGSRLP ESGTVLLTVM DADKPKAVEV ARMLHDLGYP IVATKGTAAA IEAAGVPVKV VNKVKDGRPH IVDMIKNGEI ALVFTTVDET RQAIADSRSI RMSAQAHKVT YYTTMSGARA AVEGLRYLKD LEVYDLQGLH ARLN
|
| |