Gene Bcen_0807 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_0807 
Symbol 
ID4091560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp870837 
End bp872414 
Gene Length1578 bp 
Protein Length525 aa 
Translation table11 
GC content67% 
IMG OID638014077 
Productlytic transglycosylase, catalytic 
Protein accessionYP_620690 
Protein GI107022363 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000488034 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGACTTA TATTGAGTGC GATGGTGGTG CTGCTACTCG CCGCTTGTGC GAGCCAGCCC 
CCTGTCGCCA ACAACGCCGC CGATTCGCAG GCGACGTCCA ACTACCTCCG TAAATCAGCC
ACCGCCAAAG AAACTGTCGA CGTCGACAAG CAATCCGTCG GCGACCTGAC CACTGCGGAC
TCCGATCTCT GGGCGCGCAT TCGCCGCGGC TTCCAGATGC CCGACCTGCA GAGCGATCTG
GTCGACATGC AGACGACCTG GTATACGCAG CGTCCCGATT ACGTGCAGCG CATGACCGAG
CGCTCGCAGA AGTACCTGTA TCACATCGTC GAGGAGCTCG AGGCGCGTCA CATGCCGACC
GAGCTCGCGC TGCTGCCGTT CATCGAGTCC GCGTACAACC CGCAGGCGCT GTCGGTCGCG
AAGGCGGCCG GCATGTGGCA GTTCATGCCC GGCACCGGCC GCACGTACAA CCTGAAGCGC
AACATGTGGC AGGACGAGCG CCGCGACGTG CTCGCGTCGA CGAGCGCCGC GCTCGACTAC
CTGTCCCGCC TGCACGACAT GTTCGGCGAC TGGTATCTGG CGCTGGCCGC GTACAACTGG
GGCGAAGGCA ACGTGCAGCG CGCGATCGCG CGCAACCAGG CGGCCGGCTT GCCGACCGAC
TACCAGAACC TGCGGATGCC GAACGAGACG CGCAACTACG TGCCGAAGCT GCAGGCGGTG
AAGAACATCA TCGCGAGCCC GCAGCAGTAC GGCCTGGCGC TGCCGGATAT CCCGAACCAC
CCGTATTTCG TGACGGTCAC GACGTCGCGC GACATCGACG TGGCGGTGGC CGCGAAGCTC
GCGAACCTGC CGCTCGACGA ATTCCGCTCG CTGAACCCGT CGTTCTCGAA GCCCGTGATC
CTCGGCGCGA CCGAGCCGCA GATCCTGCTG CCGTTCGACA ACGCATCCGC GTTCGAGAAG
AGCCTGAAAG CGTACAACGG CCAGCTGTCG TCGTGGACCA CCTACACGGT CAGCGAGCGT
GCACGCCCGG CCGCGATCGC CGAGAAGATC GGCGTCGACG CCGATACGCT GATGTCGGTC
AACAAGATTC CGGCCGGCAT GCGCCTGAAG CCGGGCTCGA CGATCGTCGT GCCGCGCGGC
AATGACGACG ACGAGGACAT CAGCGCCGAC GTCGCCGAAA ACGGCGCGCT CGCGATGGAG
CCGGACGTCC CCGATACGCG CAAGATGCTG ATCCGCGTGC GCCGCAAGCA GTCGATGGCG
GCGATCGCCG GCCGCTATGG CGTGTCGGTC GGCCAGTTGA AGGCGTGGAA CCGTACGCGC
CGCGATCTCG CGATGCCGGG TCAGGCGCTC GTGCTGCACG TGCCGGTCGG CCGTTCGGTG
CCGGCGGAAC CCGGTCCGGA GCGGATCGCG ACGTCGACGG GCGGTGCGCA CATCGAGCGC
GCGAGCCTGG CGGTGGGCGG CAAGTCGCAC GGCGGCAAGC GCGGCGCCGC GAAGTCGTCG
GCCCGGCCAG CGGCGAAGGC CGCGCCCGCG AAAGCCGCGC CGGCCAAGGC CGCCGCGCAC
AAGGGCAAGA AGAAGTAA
 
Protein sequence
MRLILSAMVV LLLAACASQP PVANNAADSQ ATSNYLRKSA TAKETVDVDK QSVGDLTTAD 
SDLWARIRRG FQMPDLQSDL VDMQTTWYTQ RPDYVQRMTE RSQKYLYHIV EELEARHMPT
ELALLPFIES AYNPQALSVA KAAGMWQFMP GTGRTYNLKR NMWQDERRDV LASTSAALDY
LSRLHDMFGD WYLALAAYNW GEGNVQRAIA RNQAAGLPTD YQNLRMPNET RNYVPKLQAV
KNIIASPQQY GLALPDIPNH PYFVTVTTSR DIDVAVAAKL ANLPLDEFRS LNPSFSKPVI
LGATEPQILL PFDNASAFEK SLKAYNGQLS SWTTYTVSER ARPAAIAEKI GVDADTLMSV
NKIPAGMRLK PGSTIVVPRG NDDDEDISAD VAENGALAME PDVPDTRKML IRVRRKQSMA
AIAGRYGVSV GQLKAWNRTR RDLAMPGQAL VLHVPVGRSV PAEPGPERIA TSTGGAHIER
ASLAVGGKSH GGKRGAAKSS ARPAAKAAPA KAAPAKAAAH KGKKK