Gene Bcen_0650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_0650 
Symbol 
ID4092177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp695199 
End bp696695 
Gene Length1497 bp 
Protein Length498 aa 
Translation table11 
GC content68% 
IMG OID638013916 
Productpeptidase S1C, Do 
Protein accessionYP_620533 
Protein GI107022206 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID[TIGR02037] periplasmic serine protease, Do/DeqQ family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAAAC TCACGCTGCG CAAAGTGCTC GCGGCGGCGG CGCTGTGTGC CTGCCTGCCG 
CTCGTCCCGC AAACCGCGGT CGCTGTCACG CCTCCGGCTG CCAGCCTTCC CGATTTCGCC
GACCTCGTCG AAAAGGTCGG CCCGGCCGTC GTGAACATCC GGACCACCGC CAACGTGCCG
ACGAGCGGCC CGCGCGGGAT GCTCCCGCCC GGCTTCGACA ACGGCGACAT GTCGGAATTC
TTCCGGCGCT TCTTCGGCAT TCCGCTGCCG CAGGCGCCCG GCAACGGCGG CGGCAACGGC
AGCAACCCGA AGAACGCGCC GGCGCCGGAC AACGGGCCCG ACACCGAGCA GAATCGCGGC
GTCGGCTCGG GCTTCATCGT GTCGGCCGAC GGTTACGTGA TGACCAATGC GCACGTCGTC
GACGATGCCG ACACCATCTA CGTGACGCTG ACCGACAAGC GTGAATTCAA GGCGAAGCTG
ATCGGCGTCG ACGACCGCAC GGACGTCGCG GTCGTCAAGA TCCAGGCGTC GAACCTGCCG
GTCGTTGCGA TCGGCGATTC GAACAAGGTG CGCGTCGGCG AGTGGGTCGT CGCGATCGGT
TCGCCGTTCG GCCTCGACAA CACGGTCACG GCCGGCATCG TCAGCTCGAA GAGCCGCAAT
ACGGGCGACT ACCTGCCGTT CATCCAGACC GACGTCGCCG TGAACCCCGG CAACTCGGGC
GGCCCGCTGA TCAACATGCA GGGCGAGGTG ATCGGCATCA ACTCGCAGAT CTACAGCCGC
ACCGGCGGCT TCATGGGCAT TTCGTTCGCG ATTCCGATCG ACGAGGCGAT GCGCGTGGCC
GACCAGCTGA AGGCGACGGG CAAGGTCACG CGCGGCCGGA TCGCGGTGGC GATCGGCGAG
GTGACGAAGG ACGTGGCCGA CTCGATCGGG CTGCCGAAGG CCGAAGGCGC GCTCGTCAGC
AGCGTCGAGC CGGGCGGCCC GGCCGACAAG GCCGGCATCC AGCCGGGCGA CATTATCCTG
AAGTTCAACG GCCGTCCGGT CGACGCGGCG TCGGACCTGC CGCGCATGGT CGGCGACACG
AAGCCCGGCA CGAAGGCGAC GGTCAACGTG TGGCGCAAGG GTCAGGCACG CGATCTGCCG
ATCACGATCG CCGAGACGCC GGCCGAGTCG ACGGCCAAGG CCGAGCAGCG CAAGAACGCG
CCGCAGAAGC CGCGCCAGAC CAATTCCCTC GGCCTGACGG TCAGCGACCT GACGGCGGAG
CAGTTGAAGA CGCTGAAGCT GAAGAACGGG GTGCAGATCG ACGGCGTCGA CGGCCCGGCC
GCCCGTGCGG GCCTGCAGCG CGGCGACATC GTGCTGCGCG TCGGCGACAC CGACATCACG
AGCGCGAAGC AGTTCGCCGA CGTGACCGCG CAGCTCGATC CGCAGAAGGC GGTCGCGGTG
CTCGTGCGGC GTGGCGACAA CACGCAGTTC GTGCCGGTGC GGCCGCGCCA GAAGTAA
 
Protein sequence
MTKLTLRKVL AAAALCACLP LVPQTAVAVT PPAASLPDFA DLVEKVGPAV VNIRTTANVP 
TSGPRGMLPP GFDNGDMSEF FRRFFGIPLP QAPGNGGGNG SNPKNAPAPD NGPDTEQNRG
VGSGFIVSAD GYVMTNAHVV DDADTIYVTL TDKREFKAKL IGVDDRTDVA VVKIQASNLP
VVAIGDSNKV RVGEWVVAIG SPFGLDNTVT AGIVSSKSRN TGDYLPFIQT DVAVNPGNSG
GPLINMQGEV IGINSQIYSR TGGFMGISFA IPIDEAMRVA DQLKATGKVT RGRIAVAIGE
VTKDVADSIG LPKAEGALVS SVEPGGPADK AGIQPGDIIL KFNGRPVDAA SDLPRMVGDT
KPGTKATVNV WRKGQARDLP ITIAETPAES TAKAEQRKNA PQKPRQTNSL GLTVSDLTAE
QLKTLKLKNG VQIDGVDGPA ARAGLQRGDI VLRVGDTDIT SAKQFADVTA QLDPQKAVAV
LVRRGDNTQF VPVRPRQK