Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_0522 |
Symbol | |
ID | 4093557 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | + |
Start bp | 562109 |
End bp | 564475 |
Gene Length | 2367 bp |
Protein Length | 788 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638013784 |
Product | (p)ppGpp synthetase I, SpoT/RelA |
Protein accession | YP_620407 |
Protein GI | 107022080 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.84661 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCACCA CCCCATCGTC CGCCTCCGCG GATTCGACCA CCGAAGCCAC GGCCCAGTCG CCTGCGCGCC AGTACATCGA CGCGGTCCTC GAACAGTCCT TCCGGCATCT GTTCGGGCCG ACCGCCACAC CGGAGCAGCC GCGCAAGCAC GGCGTCGTTT CGATCGCGAA ACTGACCGCC GCGCTTGCCG AGTATCTCGC TCCGGACGAA ATCAAAGAGG TCAAGGCGGC GTTCCACTTC AGCGACGAAG CCCACCTCGG TCAATATCGC CAGAGCGGCG AGCCCTACAT CACCCATCCC GTCGCCGTCG CGGAAATCTG CGCCGGCTGG AAGCTCGACG CGCAGGCCGT GATGGCCGCG TTGCTGCACG ACGTGATGGA AGACCAGGGC GTGACCAAGA ACGAGCTGGC CGAGCGGTTC GGCCCGAAGG TCGCCGAGCT GGTCGACGGC CTGTCGAAGC TCGACAAGAT GGAATTCCGC AGCCGCGAGG AAGCGCAGGC GGAAAACTTC CGCAAGATGC TGCTCGCGAT GGCGCGCGAC GTGCGCGTCA TTCTCGTCAA GCTCGCCGAT CGCTTGCACA ACATGCGCAC GCTCGGCGCG GTGCCGATGG AAAAACGCCG CCGCGTCGCG CGGGAAACGC TCGACATCTA CGCGCCGATC GCGCACCGGC TCGGGTTGAA CAACACGTAT CGCGAGCTGC AGGACATGAG CTTCGCGAAC TTCAACCCGC ATCGCTACGC GACGCTCGAG AAGGCGGTGA AGGCCGCGCG CGGCAATCGC CGCGAAGTGA TCAGCAAGAT CCTCGAGGCC GCGCAGCGCG CGATGGCCGA CGCGAAGATC GATGCCGAGA TCACCGGCCG CGAGAAAACC ATCTACAGCG TCTATCGCAA GATGCGCGAC AAGCAGCTGT CGTTCTCGCA GGTGCTCGAC GTGTACGGCT TCCGCGTCGT CGTCGACAGC CCGCTCGACT GCTACACGTG CATCGGCGCG CTGCACGCGC TGTACAAGCC CGTGCCCGGC AAGTTCAAGG ATTACATCGC GATCCCGAAG ATCAACGGCT ATCAGTCGTT GCACACGACG CTCGTCGGCC CGTTCGGCGC GCCGATCGAG TTCCAGGTGC GTACGCGCAA GATGCACGAG ATCGCCGAGG CGGGGGTCGC CGCGCACTGG CTGTACAAGA ACGGCAGCGC GGACCTCAGC GACGTGCAGA AGCGCGCGCA TCAGTGGCTG AAGTCGCTGC TCGACATCCA GAGCGAAGCG GGCGATTCGA GCGAATTCCT CGAGCACGTG AAGATCGACC TGTTCCCCGA CGCGGTCTAC GTGTTCACGC CGAAGTCGAA GATCATGGCG CTGCCGCGTG GCGCGACGGC GCTCGATTTC GCGTATTCGA TCCACAGCGA TCTCGGCAAC CAGTGCGTGG CCGTGAAGAT CAACAACGAA CTGCTGCCGC TGCGCACCGA ATTGAAGAGC GGCGACATCG TCGAGGTGAT CACCGCGCCG TATTCGAAGC CGAACCCTGC ATGGCTCGGC TTCGTGCGCA CCGGCAAGGC ACGCTCGGCG ATCCGTCACT ACCTGAAGAC GATGCGCCTG AACGAGTCCG TGCAGCTGGG CGAGCGGCTC GTTGACCAGA GCCTGAAGGG CTATGGTCTC GCGCTGGCCG ACGTCGAGCC GGAAGTGTGG GAGAAGCTCG TGCAGTGGAC GGGCAACAAG AGCCGTCAGG AAATCTTCGC GGACATCGGC CTCGGTCGTC GCGTCGCCGC GGTGATGGCC AAGCGCATCG AGGTGCTGAT GAGCGGCCGC GACGCGGACG ACGATCTGCC GAAGTCCGAG CGGCATCCCG CGCATCATGC GCCGCCGGTC GTGATTACCG GCACCGAAGG GATGTCCGTG CAGTTGTCCG CCTGCTGCCG GCCGATCCCG GGCGACGCGA TCATGGGCTA CATCGGCATC GGTCTGGGCA TGGCGATTCA TACGACGGAC TGCCGTGTCG CGCAGCGCAT CCATCGCCGC GATCCGGGCC GCTGGATCGA CGTCGAATGG GCGCCGCAGC CGGGCCGCCT GTTCGATGTC GCGGTGAAGG CGCTGGTGAA GAACACGAAG GGCATCTTCG CGCGCGTCGC GGCGGACATC ACGTCGGCCG ACGCGAACAT CGTTCATATC GCGATGGACG AGGATCTGAC GCACGAATCG ACGGTGCTGC GCTTCGTGAT CCAGGTCAGC GACCGCGTGC ATCTCGCGAA CGTGATGCGG CGCGTGAGAA CCAATCCCGA CGTGATGCGG ATCATGCGCG AGCGCTCGAC CGACGACGGT GCGCATGCGC GCCATGACGG CGGCATGCGT ATCGAGCGCG AGCGGCAGGA CTACTGA
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Protein sequence | MSTTPSSASA DSTTEATAQS PARQYIDAVL EQSFRHLFGP TATPEQPRKH GVVSIAKLTA ALAEYLAPDE IKEVKAAFHF SDEAHLGQYR QSGEPYITHP VAVAEICAGW KLDAQAVMAA LLHDVMEDQG VTKNELAERF GPKVAELVDG LSKLDKMEFR SREEAQAENF RKMLLAMARD VRVILVKLAD RLHNMRTLGA VPMEKRRRVA RETLDIYAPI AHRLGLNNTY RELQDMSFAN FNPHRYATLE KAVKAARGNR REVISKILEA AQRAMADAKI DAEITGREKT IYSVYRKMRD KQLSFSQVLD VYGFRVVVDS PLDCYTCIGA LHALYKPVPG KFKDYIAIPK INGYQSLHTT LVGPFGAPIE FQVRTRKMHE IAEAGVAAHW LYKNGSADLS DVQKRAHQWL KSLLDIQSEA GDSSEFLEHV KIDLFPDAVY VFTPKSKIMA LPRGATALDF AYSIHSDLGN QCVAVKINNE LLPLRTELKS GDIVEVITAP YSKPNPAWLG FVRTGKARSA IRHYLKTMRL NESVQLGERL VDQSLKGYGL ALADVEPEVW EKLVQWTGNK SRQEIFADIG LGRRVAAVMA KRIEVLMSGR DADDDLPKSE RHPAHHAPPV VITGTEGMSV QLSACCRPIP GDAIMGYIGI GLGMAIHTTD CRVAQRIHRR DPGRWIDVEW APQPGRLFDV AVKALVKNTK GIFARVAADI TSADANIVHI AMDEDLTHES TVLRFVIQVS DRVHLANVMR RVRTNPDVMR IMRERSTDDG AHARHDGGMR IERERQDY
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